home > bioproject > PRJEB33196
identifier PRJEB33196
type bioproject
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title Genomic Selection for resistance to cattle tick ( Rhipicephalus (Boophilus) microplus) in Hereford and Braford Breeds
description Genetic resistance in cattle has been suggested as a suitable way to maintain tick burden under control and its consequent losses for livestock production. Exploring animals previously exposed to ticks segregated into tick-resistant (R) and tick-susceptible (S) hosts, we investigated the genetic mechanisms underlying the variation of Braford resistance to tick infestation. Skin biopsies were collected before the first tick infestation and 24h after the fourth, from R (n=20) and S (n=19) four times-infested hosts, and submitted to RNA-Sequencing. Differential gene expression, functional enrichment, and network analysis were performed to identify genetic pathways affecting the variation of host resistance. Potential transcription factors (TFs) orchestrating the variation of gene expression were also predicted.
data type Other
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properties 
{...}
dbXrefs
sra-run  ERR3403501ERR3403502ERR3403503ERR3403504ERR3403505ERR3403506ERR3403507ERR3403508ERR3403509ERR3403510 More
sra-submission  ERA2022067
biosample  SAMEA5735692SAMEA5735693SAMEA5735694SAMEA5735695SAMEA5735696SAMEA5735697SAMEA5735698SAMEA5735699SAMEA5735700SAMEA5735701 More
sra-study  ERP115965
sra-sample  ERS3538990ERS3538991ERS3538992ERS3538993ERS3538994ERS3538995ERS3538996ERS3538997ERS3538998ERS3538999 More
sra-experiment  ERX3427248ERX3427249ERX3427250ERX3427251ERX3427252ERX3427253ERX3427254ERX3427255ERX3427256ERX3427257 More
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status public
visibility unrestricted-access
dateCreated 2019-11-27T00:00:00Z
dateModified 2019-11-27T00:00:00Z
datePublished