home > bioproject > PRJEB53055
identifier PRJEB53055
type bioproject
sameAs
organism
title Genomic surveillance of Monkeypox virus in Portugal
description Whole-genome sequencing data of Monkeypox virus collected in Portugal on behalf of the National Institute of Health Dr. Ricardo Jorge (INSA), Lisbon, Portugal.Published read datasets correspond to quality-processed reads (i.e., using Trimmomatic for Illumina or NanoFilt for MinION reads) mapped to the Monkeypox virus reference genome #MT903344.1 using the INSaFLU integrated web-suite pipeline (https://insaflu.insa.pt/).
data type Other
organization
publication
Phylogenomic characterization and signs of microevolution in the 2022 multi-country outbreak of monkeypox virus.
properties 
{...}
dbXrefs
sra-run  ERR10096083ERR10096084ERR10096085ERR10096086ERR10096087ERR10096088ERR10096089ERR10096090ERR10096091ERR10096092 More
sra-submission  ERA17022100ERA17548222ERA17900962ERA14682075ERA14682078ERA14901277ERA15969728
biosample  SAMEA110675919SAMEA110675920SAMEA110675921SAMEA110675922SAMEA110675923SAMEA110675924SAMEA110675925SAMEA110675926SAMEA110675927SAMEA110675928 More
sra-study  ERP137826
sra-sample  ERS12773487ERS12773488ERS12773489ERS12773490ERS12773491ERS12773492ERS12773493ERS12773494ERS12773495ERS12773496 More
sra-experiment  ERX9633872ERX9633873ERX9633874ERX9633875ERX9633876ERX9633877ERX9633878ERX9633879ERX9633880ERX9633881 More
distribution JSONJSON-LD
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status public
visibility unrestricted-access
dateCreated 2022-05-25T00:00:00Z
dateModified 2022-05-25T00:00:00Z
datePublished