home > bioproject > PRJEB5313
identifier PRJEB5313
type bioproject
sameAs
organism
title miRNA_seq_Salmonella_pig
description Salmonella enterica serovar Typhimurium is a gram-negative bacterium that can colonize the gut of humans and several species of food producing farm animals to cause enteric or septicaemic salmonellosis. Besides compromising public health and food safety, sub-clinical salmonellosis is also believed to be a major problem affecting the profitability of the pig industry. Distinct responses to Salmonella infection have been observed in pigs, some recovering faster and shedding lower levels of Salmonella in faeces than others (low shedders, LS versus persistent shedders, PS). This trait variation could indicate the existence of a genetic component to Salmonella shedding and resistance that may be exploited in animal breeding and disease diagnostics. The study aimed to characterize changes in miRNA expression in response to Salmonella infection.
data type Transcriptome or Gene expression
organization
publication
properties 
{...}
dbXrefs
sra-run  ERR424593ERR424594ERR424595ERR424596ERR424597ERR424598ERR424599ERR424600ERR424601ERR424602 More
sra-submission  ERA283766
biosample  SAMEA2342126SAMEA2342130SAMEA2342113SAMEA2342112SAMEA2342128SAMEA2342123SAMEA2342119SAMEA2342120SAMEA2342122SAMEA2342117 More
sra-study  ERP004713
sra-sample  ERS399810ERS399814ERS399797ERS399796ERS399812ERS399807ERS399803ERS399804ERS399806ERS399801 More
sra-experiment  ERX390902ERX390906ERX390889ERX390888ERX390904ERX390899ERX390895ERX390896ERX390898ERX390893 More
distribution JSONJSON-LD
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bioproject.xml  HTTPS FTP
status public
visibility unrestricted-access
dateCreated 2014-12-15T00:00:00Z
dateModified 2014-12-15T00:00:00Z
datePublished 2014-12-14T00:00:00Z