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identifier PRJEB6588
type bioproject
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title The clonal relationships between pre-cancer and cancer revealed by ultra-deep sequencing
description Previous work studying the clonal evolution of cancer has inferred the earliest mutations by comparisons of multiple patients or examination of variant allele frequencies. We performed ultra-deep sequencing of selected variants and copy number analysis from multiple pre-invasive lesions, primary tumors and metastatic samples from five oral squamous cell carcinoma patients, some with multiple primary tumors presenting either synchronously or metachronously. This allowed the earliest genomic events to be directly observed. We used a novel approach to analyze the clonal network of mutations across each patient’s disease, revealing the relationships between pre-cancer and cancer and, ultimately, the diversity of mechanisms of tumor initiation, spread and metastasis.
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The clonal relationships between pre-cancer and cancer revealed by ultra-deep sequencing.
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dbXrefs
sra-run  ERR550540ERR550541ERR550542ERR550543ERR550544ERR550545ERR550546ERR550547ERR550548ERR550549 More
sra-submission  ERA323269
biosample  SAMEA2609573SAMEA2609574SAMEA2609575SAMEA2609576SAMEA2609577SAMEA2609578SAMEA2609579SAMEA2609580SAMEA2609581SAMEA2609582 More
sra-study  ERP006136
sra-sample  ERS483091ERS483092ERS483093ERS483094ERS483095ERS483096ERS483097ERS483098ERS483099ERS483100 More
sra-experiment  ERX509609ERX509610ERX509611ERX509612ERX509613ERX509614ERX509615ERX509616ERX509617ERX509618 More
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status public
visibility unrestricted-access
dateCreated 2015-06-14T00:00:00Z
dateModified 2015-06-14T00:00:00Z
datePublished 2015-06-14T00:00:00Z