home > bioproject > PRJEB6656
identifier PRJEB6656
type bioproject
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organism
title Sequencing of fast and slow muscle of pacu
description Fish myotomal muscle is composed of anatomically segregated fibre types (slow, intermediate and fast) with distinct metabolic phenotypes. Pacu (Piaractus mesopotamicus) is a member of the Characiform family native to the Prata Basin (South America) and is a target of aquaculture industry. The main limitations for the development of a selective breeding program for this species are the lack of genetic information. The primary objectives of the present study were 1) to use NGS to increase the genetic resources available for Pacu, 2) to exploit the anatomical separation of fibre types to compare the transcriptomes of Slow and Fast muscles. We sequenced fast and slow skeletal muscle (n=5) using a HiSeq 2000.
data type Other
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properties 
{...}
dbXrefs
sra-run  ERR556963ERR556964ERR556965ERR556966ERR556967ERR556968ERR556969ERR556970ERR556971ERR556972
sra-submission  ERA325771ERA325777
biosample  SAMEA2627580SAMEA2627581SAMEA2627582SAMEA2627583SAMEA2627584SAMEA2627692SAMEA2627693SAMEA2627694SAMEA2627695SAMEA2627696
sra-study  ERP006210
sra-sample  ERS497453ERS497454ERS497455ERS497456ERS497457ERS497460ERS497461ERS497462ERS497463ERS497464
sra-experiment  ERX516032ERX516033ERX516034ERX516035ERX516036ERX516037ERX516038ERX516039ERX516040ERX516041
distribution JSONJSON-LD
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status public
visibility unrestricted-access
dateCreated 2014-08-19T00:00:00Z
dateModified 2014-08-19T00:00:00Z
datePublished 2014-08-18T00:00:00Z