home > bioproject > PRJEB6718
identifier PRJEB6718
type bioproject
sameAs
organism
title Malaria Parasites use DNA-Harbouring Vesicles as a Mechanism to Activate Cytosolic Immune Sensors
description Non-coding RNA such as miRNA is contained in exosomes and can play an important role in cell-cell communication (Valadi et al., 2007). To determine whether exosomes secreted from ring-stage iRBCs contain non-coding RNA and/or coding RNA, total RNA was isolated from exosomes and uRBCs vesicles. The RNA content extracted was assessed using a small RNA Bioanalyser assay. Small RNA deep sequencing using the Ion Torrent PGM and 200bp chemistry was performed to obtain an unbiased profile of non-coding RNA contained in exosomes and vesicles secreted from infected and uninfected RBC cultures. Upon mapping to human miRNA, 229 miRNA were found to be abundantly present in all samples, and the most abundant was hsa-miR-451a. Notably, the majority of human miRNA were found to be present at lower levels in iRBCs exosomes compared to uRBC vesicles.Although further studies are required, these findings raise the possibility that parasite exosomes act on different host cells to manipulate their RNA profiles.
data type Other
organization
publication
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{...}
dbXrefs
sra-run  ERR562810ERR562811ERR562812ERR562813ERR562814ERR562815
sra-submission  ERA330307
biosample  SAMEA2646051SAMEA2646052SAMEA2646053SAMEA2646054SAMEA2646055SAMEA2646056
sra-study  ERP006355
sra-sample  ERS506029ERS506030ERS506031ERS506032ERS506033ERS506034
sra-experiment  ERX521835ERX521836ERX521837ERX521838ERX521839ERX521840
distribution JSONJSON-LD
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bioproject.xml  HTTPS FTP
status public
visibility unrestricted-access
dateCreated 2014-09-16T00:00:00Z
dateModified 2014-09-16T00:00:00Z
datePublished 2014-09-15T00:00:00Z