home > bioproject > PRJNA119
identifier PRJNA119
type bioproject
sameAs
organism Solanum lycopersicum
title Sequencing of the tomato genome by the international consortium
description

Sequencing of the tomato genome will be done by an international consortium of researchers as part of the Solanaceae Genomics Project. The plan is to sequence the gene rich regions of all 12 chromosomes on BAC by BAC basis and annotate it. The US has agreed to sequence chromosomes 1 and 10 with the majority of the funding by the NSF and the USDA Plant Genome program. Other participating member countries are Korea (chromosome 2), China (chromosome 3 and 11), UK (chromosome 4), India (chromosome 5), The Netherlands (chromosome 6), France (chromosome 7), Japan (chromosome 8) Spain (chromosome 9) and Italy (chromosome 12).

data type Genome sequencing and assembly
organization
Cornell University
Solanaceae Genomics Project
publication
Characteristics of the tomato nuclear genome as determined by sequencing undermethylated EcoRI digested fragments.
A deep-coverage tomato BAC library and prospects toward development of an STC framework for genome sequencing.
external link
Solanaceae Genomics Network
GOLD
International Tomato Genome Sequencing Project
properties 
{...}
dbXrefs
sra-run  SRR14191280SRR363116SRR363117SRR363118SRR363119SRR363120SRR363121SRR363122SRR363123SRR363124 More
sra-submission  SRA1216479SRA047925SRA050797SRA048144
biosample  SAMN18676047SAMN02981290SAMN00750243SAMN00750244SAMN00750245SAMN00750246SAMN00750247SAMN00750248SAMN00750249SAMN00750250 More
sra-study  SRP011485SRP009216SRP009671
sra-sample  SRS8664545SRS269769SRS269770SRS269771SRS269772SRS269773SRS269774SRS269775SRS269776SRS269777 More
sra-experiment  SRX10558138SRX104794SRX104795SRX104796SRX104797SRX104798SRX104799SRX104800SRX104801SRX104802 More
distribution JSONJSON-LD
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status public
visibility unrestricted-access
dateCreated 2003-02-25T00:00:00Z
dateModified 2003-02-25T00:00:00Z
datePublished 2010-12-10T00:00:00Z