home > bioproject > PRJNA175166
identifier PRJNA175166
type bioproject
sameAs
organism Arthrobacter sp. 162MFSha1.1
title Arthrobacter sp. 162MFSha1.1
description Rhizosphere Grand Challenge Isolate Sequencing. The goal of this project is to comprehensively characterize the genomes of microorganisms found in the rhizosphere and endosphere of Arabidopsis thaliana. Organisms for study have been targeted based on their reproducible association with one or more Arabidopsis genotypes grown in natural soil. To obtain more complete genomes from the culturable fraction of the Arabidopsis microbiome, rhizosphere and endosphere samples were used to seed cultures on a variety of media. Cultures were screened by 16S rRNA sequencing and microbes of interest grown up and subjected to whole genome sequencing. Genomic sequences will be analyzed for genes participating in the plant-microbe symbiosis.
data type Genome sequencing and assembly
organization
publication
external link
JGI Portal For Arthrobacter sp. 162MFSha1.1
GOLD Card For Arthrobacter sp. 162MFSha1.1
properties 
{...}
dbXrefs
sra-run  SRR891421
sra-submission  SRA089147
biosample  SAMN02441368SAMN02193986
sra-study  SRP025040
sra-sample  SRS438276
sra-experiment  SRX298138
distribution JSONJSON-LD
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bioproject.xml  HTTPS FTP
status public
visibility unrestricted-access
dateCreated 2012-09-13T00:00:00Z
dateModified 2012-09-13T00:00:00Z
datePublished 2013-04-19T00:00:00Z