home > bioproject > PRJNA183360
identifier PRJNA183360
type bioproject
sameAs
organism Microbacterium sp. 292MF
title Microbacterium sp. 292MF
description Rhizosphere Grand Challenge Isolate Sequencing. The goal of this project is to comprehensively characterize the genomes of microorganisms found in the rhizosphere and endosphere of Arabidopsis thaliana. Organisms for study have been targeted based on their reproducible association with one or more Arabidopsis genotypes grown in natural soil. To obtain more complete genomes from the culturable fraction of the Arabidopsis microbiome, rhizosphere and endosphere samples were used to seed cultures on a variety of media. Cultures were screened by 16S rRNA sequencing and microbes of interest grown up and subjected to whole genome sequencing. Genomic sequences will be analyzed for genes participating in the plant-microbe symbiosis.
data type Genome sequencing
organization
publication
external link
/lookup?keyName=pmoProjectId&keyValue=1001069&
properties 
{...}
dbXrefs
sra-run  SRR892173
sra-submission  SRA089635
biosample  SAMN02441725SAMN02194549
sra-study  SRP024777
sra-sample  SRS438775
sra-experiment  SRX298818
distribution JSONJSON-LD
Download
bioproject.xml  HTTPS FTP
status public
visibility unrestricted-access
dateCreated 2012-12-07T00:00:00Z
dateModified 2012-12-07T00:00:00Z
datePublished 2013-04-23T00:00:00Z