home > bioproject > PRJNA185375
identifier PRJNA185375
type bioproject
sameAs
organism Rhodococcus sp. 29MFTsu3.1
title Rhodococcus sp. 29MFTsu3.1
description Rhizosphere Grand Challenge Isolate Sequencing. The goal of this project is to comprehensively characterize the genomes of microorganisms found in the rhizosphere and endosphere of Arabidopsis thaliana. Organisms for study have been targeted based on their reproducible association with one or more Arabidopsis genotypes grown in natural soil. To obtain more complete genomes from the culturable fraction of the Arabidopsis microbiome, rhizosphere and endosphere samples were used to seed cultures on a variety of media. Cultures were screened by 16S rRNA sequencing and microbes of interest grown up and subjected to whole genome sequencing. Genomic sequences will be analyzed for genes participating in the plant-microbe symbiosis.
data type Genome sequencing
organization
publication
external link
/lookup?keyName=pmoProjectId&keyValue=1001123&
properties 
{...}
dbXrefs
sra-run  SRR892324
sra-submission  SRA089740
biosample  SAMN02440496SAMN02194636
sra-study  SRP024869
sra-sample  SRS438865
sra-experiment  SRX298942
distribution JSONJSON-LD
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bioproject.xml  HTTPS FTP
status public
visibility unrestricted-access
dateCreated 2013-01-05T00:00:00Z
dateModified 2013-01-05T00:00:00Z
datePublished 2013-04-23T00:00:00Z