home > bioproject > PRJNA187939
identifier PRJNA187939
type bioproject
sameAs
organism Cryocola sp. 340MFSha3.1
title Cryocola sp. 340MFSha3.1
description This is a reference bacterial genome from a study to characterize how plant host genes affect the microbiome community assemblage and how the microbiome influences plant phenotypes, such as drought or salt tolerance, nutrient use, productivity, pathogen resistance, and yield. Plant-associated metagenomes are being characterized by 16S ribotyping, metagenome and reference genome sequencing and metatranscriptome sequencing. Experimental systems used to characterize the interplay between host and associated communities in different plant types have been chosen to be relevant to energy and environmental concerns, for example, Arabidopsis as a model, corn, and a key biofuel crop (Miscanthus).
data type Genome sequencing and assembly
organization
publication
external link
/lookup?keyName=pmoProjectId&keyValue=1001030&
properties 
{...}
dbXrefs
sra-run  SRR892364
sra-submission  SRA089773
biosample  SAMN02440964SAMN02194788
sra-study  SRP024900
sra-sample  SRS438897
sra-experiment  SRX299059
distribution JSONJSON-LD
Download
bioproject.xml  HTTPS FTP
status public
visibility unrestricted-access
dateCreated 2013-01-29T00:00:00Z
dateModified 2013-01-29T00:00:00Z
datePublished 2013-04-26T00:00:00Z