home > bioproject > PRJNA187944
identifier PRJNA187944
type bioproject
sameAs
organism Mycobacterium sp. 360MFTsu5.1
title Mycobacterium sp. 360MFTsu5.1
description This is a reference bacterial genome from a study to characterize how plant host genes affect the microbiome community assemblage and how the microbiome influences plant phenotypes, such as drought or salt tolerance, nutrient use, productivity, pathogen resistance, and yield. Plant-associated metagenomes are being characterized by 16S ribotyping, metagenome and reference genome sequencing and metatranscriptome sequencing. Experimental systems used to characterize the interplay between host and associated communities in different plant types have been chosen to be relevant to energy and environmental concerns, for example, Arabidopsis as a model, corn, and a key biofuel crop (Miscanthus).
data type Genome sequencing and assembly
organization
publication
external link
/lookup?keyName=pmoProjectId&keyValue=1002962&
properties 
{...}
dbXrefs
sra-run  SRR892343
sra-submission  SRA089756
biosample  SAMN02440518SAMN02194773
sra-study  SRP024884
sra-sample  SRS438882
sra-experiment  SRX298959
distribution JSONJSON-LD
Download
bioproject.xml  HTTPS FTP
status public
visibility unrestricted-access
dateCreated 2013-01-29T00:00:00Z
dateModified 2013-01-29T00:00:00Z
datePublished 2013-04-26T00:00:00Z