home > bioproject > PRJNA191060
identifier PRJNA191060
type bioproject
sameAs
organism Malus domestica
title Malus domestica Transcriptome or Gene expression
description In an effort to develop high-quality gene model for the apple genome (Malus x domestica), we aligned massively parallel cDNA sequencing reads of 19 apple tissues to the v.1 apple genome. Integration of RNA-Seq allowed us to identify hundreds of transcripts that had been missed by the automatic annotation procedure, to correct predicted gene structures, and to detect a multitude of alternative and trans-splicing events. In addition we sequenced smallRNA from a fruit sample.
data type transcriptome
organization
publication
properties 
{...}
dbXrefs
sra-run  SRR765943SRR767660SRR767668SRR767669SRR767670SRR767671SRR767672SRR767673SRR767674SRR768127 More
sra-submission  SRA067361SRA067360
biosample  SAMN01923317SAMN01931795SAMN01931796SAMN01931797SAMN01931798SAMN01931799SAMN01931800SAMN01931801SAMN01931802SAMN01931803 More
sra-study  SRP018878
sra-sample  SRS398431SRS398601SRS398602SRS398603SRS398604SRS398605SRS398680SRS398681SRS398682SRS398683 More
sra-experiment  SRX245889SRX246425SRX246426SRX246428SRX246429SRX246430SRX246509SRX246510SRX246511SRX246512 More
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status public
visibility unrestricted-access
dateCreated 2013-02-27T00:00:00Z
dateModified 2013-02-27T00:00:00Z
datePublished