home > bioproject > PRJNA194575
identifier PRJNA194575
type bioproject
sameAs
organism Homo sapiens
title ChIP-seq of GR in U2OS cells expressing different GR alleles
description Glucocorticoid receptor (GR) is a hormone-activated, DNA-binding transcriptional regulatory factor, which regulates diverse aspects of physiology. GR recognizes specifically imperfect palindromic six base pair “half sites" separated by thoursee base pair “spacers”, binding as an inverted dimer. In vivo, different GR target genes depend on different functional surfaces of GR for proper regulation, but rules dictating the relationship between sequence and utilization of distinct GR functional surfaces remain unknown. In this study, we measured changes in gene expression and genomic occupancy upon glucocorticoid treatment of isogenic cultured human cell lines expressing alleles of GR bearing differences in particular functional surfaces.
data type other
organization
University of California, San Francisco
publication
properties 
{...}
dbXrefs
sra-run  SRR799588SRR799589SRR799590SRR799594SRR799913SRR799914
sra-submission  SRA072018
biosample  SAMN01993547SAMN01993548SAMN01993549SAMN01993550SAMN01993551SAMN01993552
sra-study  SRP020242
sra-sample  SRS405466SRS405474SRS405475SRS405477SRS405483SRS405484
sra-experiment  SRX256867SRX256879SRX256880SRX256883SRX256891SRX256892
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status public
visibility unrestricted-access
dateCreated 2013-03-27T00:00:00Z
dateModified 2013-03-27T00:00:00Z
datePublished