home > bioproject > PRJNA209236
identifier PRJNA209236
type bioproject
sameAs
organism Paramphistomum cervi
title Transcriptome profiling of Paramphistomum cervi isolated from Goat rumen
description Rumen flukes are socio-economically important parasitic flatworms (Platyhelminthes: Trematoda: Digenea) that attack livestock adversely thereby affecting their productivity. Despite its socioeconomic impact, almost nothing is known about the molecular biology of this parasite, its interplay with its hosts, and the molecular pathogenesis of Paramphistomosis. Recent advances in genomics and bioinformatics provide unique opportunities to gain improved insights into the biology of parasites as well as their relationships with their hosts at the molecular level. The present study reports the first transcriptome representing the adult stage of Paramphistomum cervi, defined using a massively parallel sequencing-coupled bioinformatics approach. Relative levels of transcription were determined for individual molecules, which were also characterized (at the inferred amino acid level) based on homology, gene ontology and pathway mapping. These findings are expected to provide new insights into the pathophysiology of P. cervi and for the development of improved interventions for disease control and will facilitate a more fundamental understanding of Paramphistomes biology, evolution and the host-parasite interplay.
data type transcriptome
organization
COLLAGE OF VETERINARY SCIENCE AND A.H.,AAU
publication
properties 
{...}
dbXrefs
sra-run  SRR921524
sra-submission  SRA091477
biosample  SAMN02212295
sra-study  SRP026293
sra-sample  SRS452374
sra-experiment  SRX314797
distribution JSONJSON-LD
Download
bioproject.xml  HTTPS FTP
status public
visibility unrestricted-access
dateCreated 2013-06-22T00:00:00Z
dateModified 2013-06-22T00:00:00Z
datePublished