home > bioproject > PRJNA226433
identifier PRJNA226433
type bioproject
sameAs
organism insect gut metagenome
title Gut microbiota of Cephalotes varians Metagenome
description Insect guts are often colonized by multi-species microbial communities that play integral roles in nutrition, digestion, and defense. Community composition can differ across host species with increasing dietary and genetic divergence, yet gut microbiota can also vary between conspecific hosts and across an individual’s lifespan. Through exploration of such intraspecific variation and its correlates, molecular profiling of microbial communities can generate and test hypotheses on the causes and consequences of symbioses. In this study, we used 454 pyrosequencing and TRFLP analyses to achieve these goals in an herbivorous ant, Cephalotes varians, exploring variation in bacterial communities across colonies, populations, and workers reared on different diets. We found that C. varians bacterial communities were dominated by 16 core species present in over two-thirds of the sampled colonies. Core bacteria hailed from ant-specific clades, with most having close relatives in other Cephalotes species. Yet three were detected in environmental samples, suggesting possible environmental acquisition. In spite of their prevalence and long-standing relationships with Cephalotes ants, the relative abundance and genotypic composition of core species varied across colonies. Diet-induced plasticity is a likely cause, but only pollen-based diets had consistent effects, altering the abundance of just a few bacteria. Additional factors such as host age, genetics, chance, or natural selection must therefore shape natural variation. Future studies on these possibilities and on bacterial contributions to the use of pollen, a widespread food source across Cephalotes, will be important steps in developing C. varians as a model for studying widespread social insect-bacteria symbioses.
data type metagenome
organization
publication
properties 
{...}
dbXrefs
sra-run  SRR1025906SRR1027023SRR1027025SRR1027026SRR1027027SRR1027033SRR1027696SRR1027698SRR1027707SRR1027708 More
sra-submission  SRA110000
biosample  SAMN02391138SAMN02399622SAMN02399623SAMN02399624SAMN02399625SAMN02399633SAMN02399634SAMN02399635SAMN02399636SAMN02399637 More
sra-study  SRP032758
sra-sample  SRS499480SRS500072SRS500073SRS500074SRS500075SRS500082SRS500486SRS500488SRS500498SRS500500 More
sra-experiment  SRX374127SRX374704SRX374705SRX374707SRX374708SRX374715SRX375234SRX375236SRX375246SRX375247 More
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status public
visibility unrestricted-access
dateCreated 2013-11-04T00:00:00Z
dateModified 2013-11-04T00:00:00Z
datePublished