home > bioproject > PRJNA230877
identifier PRJNA230877
type bioproject
sameAs
organism Pongo sp.
title Generation of SNP datasets for orangutan population genomics using improved reduced-representation sequencing and direct comparisons of SNP calling algorithms
description We sequenced 31 wild-born orangutans using an improved reduced-representation library (iRRL) protocol that maximizes the generation of homologous DNA sequences, thus achieving improved genotyping-by-sequencing efficiency. Our modifications facilitate generation of single-sample libraries, enabling individual genotype assignments instead of pooled-sample analysis.
data type other
organization
publication
properties 
{...}
dbXrefs
sra-run  SRR1104302SRR1104666SRR1104669SRR1104670SRR1104671SRR1104672SRR1104673SRR1104674SRR1104675SRR1104676 More
sra-submission  SRA115460
biosample  SAMN02439270SAMN02439285SAMN02439294SAMN02439295SAMN02439296SAMN02439297SAMN02439298SAMN02439299SAMN02439300SAMN02439286 More
sra-study  SRP035240
sra-sample  SRS527455SRS527820SRS527828SRS527831SRS527830SRS527832SRS527833SRS527834SRS527835SRS527821 More
sra-experiment  SRX423474SRX423838SRX423847SRX423848SRX423849SRX423850SRX423851SRX423852SRX423853SRX423839 More
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status public
visibility unrestricted-access
dateCreated 2013-12-08T00:00:00Z
dateModified 2013-12-08T00:00:00Z
datePublished