home > bioproject > PRJNA28911
identifier PRJNA28911
type bioproject
sameAs
organism Homo sapiens
title 1000 Genomes Project Pilot 1 (low coverage sequencing of 180 Hapmap individuals from multiple populations.
description 1000 Genomes first pilot study: Low coverage sequencing of 180 individuals.

The purpose of the project is to support the discovery and understanding of genetic variants that influence human disease. Specifically defined goals are (a) the discovery of single nucleotide variants at frequencies of 1% or higher in diverse populations, (b) even more comprehensive discovery (variants down to frequencies of 0.1 - 0.5%) in functional gene regions, and (c) discovery of structural variants, such as copy number variants, other insertions and deletions, and inversions, including sequence-level understanding of breakpoints.

The volume of data generated by 1000genomes project is unprecedented.

The data is accessible from two mirrored ftp sites at EBI and NCBI.
data type Variation
organization
1000 Genomes Project
publication
properties 
{...}
dbXrefs
sra-run  ERR000044ERR000046ERR000047ERR000048ERR000049ERR000050ERR000051ERR000053ERR000057ERR000058 More
sra-submission  ERA000014ERA000024ERA000034ERA000027ERA000053ERA000055ERA000015ERA000016ERA000017ERA000018 More
biosample  SAMN00001599SAMN00001608SAMN00001615SAMN00001602SAMN00001612SAMN00001622SAMN00001617SAMN00001596SAMN00001595SAMN00001616 More
sra-study  SRP000031
sra-sample  SRS000117SRS000126SRS000133SRS000120SRS000130SRS000140SRS000135SRS000114SRS000113SRS000134 More
sra-experiment  ERX000046ERX000056ERX000027ERX000023ERX000054ERX000044ERX000042ERX000020ERX000037ERX000021 More
distribution JSONJSON-LD
Download
bioproject.xml  HTTPS FTP
status public
visibility unrestricted-access
dateCreated 2008-03-04T00:00:00Z
dateModified 2008-03-04T00:00:00Z
datePublished