home > bioproject > PRJNA313193
identifier PRJNA313193
type bioproject
sameAs
organism Panicum virgatum
title Panicum virgatum Transcriptomic Responses to Aphid Pressure
description Sustainable production of switchgrass and other bioenergy grasses will require effective pest management. Currently we know little about the potential insect pests of the tetraploid switchgrass genotypes that are being developed as bioenergy cultivars for the Central USA. Identification of potential insect pests and detailed characterization of the plant-insect interaction will better enable us to address emergent insect pests in switchgrass production fields. Additionally, it is unclear how manipulation of plants for improved quality (for example lower lignin) will affect plant resistance to insect herbivory. Therefore, the research goals of this 5 year project are to identify plants with enhanced resistance to piercing-sucking insects using defined populations of switchgrass, improve our understanding of the mechanisms, genes, proteins and metabolites contributing to the resistance, and develop sustainable pest management strategies through endogenous plant resistance. This project will significantly contribute to the sustainability and profitability of bioenergy grasses in three primary ways: (1) identification of switchgrass genotypes with resistance to the yellow sugarcane aphid, chinch bug, and greenbug; (2) assemble a functional data set encompassing plant and insect interactions for the study of plant resistance mechanisms in warm-season bioenergy grasses; and (3) provide the foundation for development of sustainable pest management strategies that offer improved environmental safety and minimal human health risk.
data type transcriptome
organization
publication
Transcriptional analysis of defense mechanisms in upland tetraploid switchgrass to greenbugs.
properties 
{...}
dbXrefs
sra-run  SRR3188112SRR3188113SRR3188114SRR3188115SRR3188116SRR3188117
sra-submission  SRA357605
biosample  SAMN04516583
sra-study  SRP070829
sra-sample  SRS1310704
sra-experiment  SRX1600826SRX2530097SRX2530098SRX2530099SRX2530100SRX2530101
distribution JSONJSON-LD
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status public
visibility unrestricted-access
dateCreated 2016-02-25T00:00:00Z
dateModified 2016-02-25T00:00:00Z
datePublished