home > bioproject > PRJNA369439
identifier PRJNA369439
type bioproject
sameAs
organism Primates
title Sequence and assembly of great-ape genomes including annotation and comparative analyses using long- and short-read sequencing modalities.
description Target genomes include chimpanzee (Pan troglodytes, Clint (male)), orangutan (Pongo abelii, Susie (female)), CHM13 (Homo sapiens hydatidiform mole), and YRI (Homo sapiens, Yoruban female). Sequence and assembly of great-ape genomes including annotation and comparative analyses using long- and short-read sequencing modalities. The project will also compare and reannotate a previously published gorilla genome assembly (accessions: ERX1365589, ERX1365590,... ERX1365598).
data type Genome sequencing and assembly
organization
University of Washington
publication
Man's place in Hominoidea revealed by mitochondrial DNA genealogy.
Comparisons of ape and human sequences that regulate mitochondrial DNA transcription and D-loop DNA synthesis.
A comparison of the small ribosomal RNA genes from the mitochondrial DNA of the great apes and humans: sequence, structure, evolution, and phylogenetic implications.
Recent African origin of modern humans revealed by complete sequences of hominoid mitochondrial DNAs.
The mitochondrial DNA molecule of Sumatran orangutan and a molecular proposal for two (Bornean and Sumatran) species of orangutan.
16136131
Conservation of Y-linked genes during human evolution revealed by comparative sequencing in chimpanzee.
A mitogenomic phylogeny of living primates.
A complete sequence of the mitochondrial genome of the western lowland gorilla.
properties 
{...}
dbXrefs
sra-run  SRR5234864SRR5234865SRR5234866SRR5234867SRR5234868SRR5234869SRR5234870SRR5234871SRR5234872SRR5234873 More
sra-submission  SRA535975SRA538700SRA602744SRA606965SRA607003SRA607212SRA607214SRA607226SRA607474SRA607472 More
biosample  SAMN06272697SAMN06275555SAMN07611970SAMN07611971SAMN07611972SAMN07611993SAMN11078986SAMN11124083
sra-study  SRP098984
sra-sample  SRS1961362SRS1990180SRS2506065SRS2506103SRS2506641SRS2506642SRS4489353SRS4496054
sra-experiment  SRX2542213SRX2542214SRX2542215SRX2542216SRX2542217SRX2542218SRX2573238SRX2573260SRX2573290SRX2573291 More
distribution JSONJSON-LD
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status public
visibility unrestricted-access
dateCreated 2017-01-31T00:00:00Z
dateModified 2017-01-31T00:00:00Z
datePublished 2018-01-16T00:00:00Z