home > bioproject > PRJNA421343
identifier PRJNA421343
type bioproject
sameAs
organism Theobroma cacao
title Theobroma cacao isolate:B | cultivar:Pound 7 Genome sequencing and assembly
description Here we validate the Minion’s application to crop genomics by creating a de novo genome assembly of the heterozygous ‘Pound 7’ clone of cacao (Theobroma cacao), and compare it to the previous two cacao reference genomes. We found that quickly generating a high quality assembly of a heterozygous plant genome was possible for less than $5000, in contrast to previous cacao reference genomes, which required many years and millions of dollars to produce.
data type genome sequencing and assembly
organization
publication
properties 
{...}
dbXrefs
sra-run  SRR7204200SRR7226886SRR7227123SRR7227796SRR7229681SRR7233627SRR7233628SRR7235732SRR7235733SRR7235734
sra-submission  SRA708763SRA711837SRA711868SRA711882SRA711950SRA712399SRA712570
biosample  SAMN08140518
sra-study  SRP148703
sra-sample  SRS3328631SRS3328631
sra-experiment  SRX4113197SRX4133374SRX4133599SRX4134266SRX4136094SRX4140037SRX4140036SRX4142067SRX4142066SRX4142065
distribution JSONJSON-LD
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status public
visibility unrestricted-access
dateCreated 2017-12-06T00:00:00Z
dateModified 2017-12-06T00:00:00Z
datePublished