home > bioproject > PRJNA494419
identifier PRJNA494419
type bioproject
sameAs
organism
title Peromyscus maniculatus (North American deer mouse) and Peromyscus leucopus (white-footed mouse). Raw sequence reads
description Raw sequences reads from the paper entitled "Maladaptive phenotypic plasticity in cardiac muscle growth is suppressed in high-altitude deer mice." Jonathan P. Velotta et al. Journal Evolution. In this study we examined the role of phenotypic plasticity in evolutionary divergence between two species of Peromyscus mice that differ in native elevations. We used cardiac mass as a model phenotype, since ancestral hypoxia-induced responses of the heart may be both adaptive and maladaptive at high-altitude. While left ventricle growth should enhance oxygen delivery to tissues, hypertrophy of the right ventricle can lead to heart failure and death. We compared left- and right-ventricle plasticity in response to hypoxia between captive-bred P. leucopus (representing the ancestral lowland condition) and P. maniculatus from high-altitude. We found that maladaptive ancestral plasticity in right ventricle hypertrophy is reduced in high-altitude deer mice. Analysis of the left and right ventricle transcriptomes suggests that changes in expression of inflammatory signaling genes, particularly interferon regulatory factors, contribute to the suppression of right ventricle hypertrophy. We found weak evidence that adaptive plasticity of left ventricle mass contributes to evolution. Our results suggest that selection to suppress ancestral maladaptive plasticity plays a role in adaptation.
data type raw sequence reads
organization
publication
external link
Jonathan Velotta
Zac Cheviron Lab
properties 
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dbXrefs
sra-run  SRR7985623SRR7985624SRR7985625SRR7985626SRR7985627SRR7985628SRR7985629SRR7985630SRR7985631SRR7985632 More
sra-submission  SRA791024
biosample  SAMN10167269SAMN10167268SAMN10167257SAMN10167256SAMN10167273SAMN10167272SAMN10167275SAMN10167274SAMN10167251SAMN10167250 More
sra-study  SRP164728
sra-sample  SRS3892799SRS3892798SRS3892797SRS3892796SRS3892795SRS3892794SRS3892793SRS3892792SRS3892835SRS3892791 More
sra-experiment  SRX4818254SRX4818253SRX4818252SRX4818251SRX4818250SRX4818249SRX4818248SRX4818247SRX4818246SRX4818245 More
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status public
visibility unrestricted-access
dateCreated 2018-10-02T00:00:00Z
dateModified 2018-10-02T00:00:00Z
datePublished