home > bioproject > PRJNA77799
identifier PRJNA77799
type bioproject
sameAs
organism Theobroma cacao
title Comparison of Theobroma cacao cultivars: Low coverage WGS approach
description This sequence data was generated as part of a project that exploredthe utility of whole-chloroplast sequences to distinguishintra-specific variation in cultivated cacao (Theobroma cacao). Ourdata demonstrates that the whole chloroplast sequence of cultivatedcacao lineages harbor sufficient information to reliably distinguishvarieties and even individual genotypes. We conclude that thisapproach, which could be understood as a extension of the traditional'DNA-barcoding' concept through next-generation sequencing, showsgreat promise for applications where very closely related orinterbreeding taxa must be distinguished.
data type genome sequencing
organization
publication
properties 
{...}
dbXrefs
sra-run  SRR376997SRR376998SRR377709SRR377711SRR377712SRR377715SRR377719SRR377720SRR377721SRR377722
sra-submission  SRA048198
biosample  SAMN00760520SAMN00760521SAMN00760522SAMN00760523SAMN00760524SAMN00760525SAMN00760526SAMN00760527SAMN00760528SAMN00760529
sra-study  SRP009436
sra-sample  SRS280875SRS280876SRS280877SRS280878SRS280879SRS280880SRS280881SRS280882SRS280883SRS280884
sra-experiment  SRX107973SRX108069SRX108116SRX108117SRX108122SRX108123SRX108124SRX108125SRX108126SRX108127
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status public
visibility unrestricted-access
dateCreated 2011-11-13T00:00:00Z
dateModified 2011-11-13T00:00:00Z
datePublished