home > bioproject > PRJNA78799
identifier PRJNA78799
type bioproject
sameAs
organism Helicoverpa zea
title Helicoverpa zea strain:HZAM1 Transcriptome or Gene expression
description The Helicoverpa armigera single-capsid nucleopolyhedrovirus (HaSNPV) can be propagated using H. zea insect cell cultures, for use as a biopesticide against Heliothine agricultural pests. This study sequenced, assembled and functionally annotated 29,586 transcript sequences from cultured H. zea cells using Illumina 100 bps and paired-end transcriptome sequencing (RNA-seq). From these sequences, a genome-scale microarray platform was constructed and validated for effective expression analysis of H. zea genes. This array also included probes for all HaSNPV genes, thereby allowing virus and host gene changes to be monitored simultaneously. The Helicoverpa zea cell line, designated as BCIRL-NZ-AM1, was isolated from pupal ovarian tissue by McIntosh and Ignoffo (1983).
data type transcriptome
organization
The University of Queensland
publication
properties 
{...}
dbXrefs
sra-run  SRR388322
sra-submission  SRA048534
biosample  SAMN00764824
sra-study  SRP009661
sra-sample  SRS281964
sra-experiment  SRX110726
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status public
visibility unrestricted-access
dateCreated 2011-12-07T00:00:00Z
dateModified 2011-12-07T00:00:00Z
datePublished