home > bioproject > PRJNA79591
identifier PRJNA79591
type bioproject
sameAs
organism Drosophila melanogaster
title The Drosophila HP1 Homolog Rhino Is Required for Transposon Silencing and piRNA Production by Dual-Strand Clusters
description Piwi-interacting RNAs (piRNAs) silence transposons andmaintain genome integrity during germline development. In Drosophila, transposon-rich heterochromatic clusters encode piRNAs either on both genomic strands (dual-strand clusters) or predominantly one genomic strand (uni-strand clusters). Primary piRNAs derived from these clusters are proposed to drive a ping-pong amplification cycle catalyzed by proteins that localize to the perinuclear nuage. We show that the HP1 homolog Rhino is required for nuage organization, transposon silencing, and ping-pong amplification of piRNAs. rhimutations virtually eliminate piRNAs from the dual-strand clusters and block production of putative precursor RNAs from both strands of the major 42AB dualstrand cluster, but not of transcripts or piRNAs from the uni-strand clusters. Furthermore, Rhino protein associates with the 42AB dual-strand cluster,but does not bind to uni-strand cluster 2 or flamenco. Rhino thus appears to promote transcription of dual-strand clusters, leading to production of piRNAs that drive the ping-pong amplification cycle.
data type Transcriptome or Gene expression
organization
publication
The Drosophila HP1 homolog Rhino is required for transposon silencing and piRNA production by dual-strand clusters.
properties 
{...}
dbXrefs
sra-run  SRR037091SRR037092
sra-submission  SRA012158
biosample  SAMN00009570SAMN00009572
sra-study  SRP002060
sra-sample  SRS011843SRS011845
sra-experiment  SRX017296SRX017297
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status public
visibility unrestricted-access
dateCreated 2011-12-20T00:00:00Z
dateModified 2011-12-20T00:00:00Z
datePublished