home > bioproject > PRJNA81189
identifier PRJNA81189
type bioproject
sameAs
organism Musa acuminata AAA Group
title Musa acuminata AAA Group strain:Brazilian and Nongke No 1 Transcriptome or Gene expression
description Fusarium wilt, caused by the fungal pathogen Fusarium oxysporum f. sp. cubense (Foc), is the most important lethal disease of banana. The pathogen contain 4 races and 24 VCG groups, and among them, tropical race 4 (TR4) is the most predominant and damaging biotype. Some resistant somaclonal mutants have been discovered. Yet little is understood about its innate immunity, for there are no sufficient transcriptomic and genomic data in public databases. Thus, the transcriptome profiling analysis of Foc TR4-challenged resistant mutant and susceptible wild type banana roots is needed to generate enormous transcript sequences and to gain insights into the defense response.
data type Transcriptome or Gene expression
organization
Intitute of Friut Tree Research, Guangdong Academy of Agricultrue Sceinces
publication
Transcriptome profiling of resistant and susceptible Cavendish banana roots following inoculation with Fusarium oxysporum f. sp. cubense tropical race 4.
properties 
{...}
dbXrefs
sra-run  SRR407291SRR446448SRR446449SRR446450SRR446451SRR446452SRR495214SRR495216
sra-submission  SRA049253
biosample  SAMN00773117SAMN00829051SAMN00829052SAMN00829053SAMN00829054SAMN00829055SAMN00991642SAMN00991641
sra-study  SRP010324
sra-sample  SRS287115SRS301505SRS301506SRS301507SRS301508SRS301509SRS332265SRS332264
sra-experiment  SRX115913SRX130339SRX130341SRX130340SRX130342SRX130343SRX146849SRX146848
distribution JSONJSON-LD
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status public
visibility unrestricted-access
dateCreated 2012-01-12T00:00:00Z
dateModified 2012-01-12T00:00:00Z
datePublished