home > bioproject > PRJNA81851
identifier PRJNA81851
type bioproject
sameAs
organism hypersaline lake metagenome
title Hypersaline Lake Metagenome
description Lake Tyrrell is a hypersaline lake in northwestern Victoria, Australia, located 380 km east of Adelaide (35.309oS 142.795oE). Sampling locations in the central portion of the lake have been the focus of a three-year study to deeply sequence microbial populations over time scales of hours, days, months, and years.Sample collection began in 2007 and is ongoing. Each sample is an aqueous lake water sample, sequentially filtered to retain different size fractions for metagenomic sequencing, including 3-20 um, 0.8-3 um, and 0.1-0.8 um sizes. Post-0.1 um filtrate (the viral fraction) is the size fraction that we are uploading at this time, but data from other size fractions may be available in the future.
data type Genome sequencing and assembly
organization
University of California, Berkeley
publication
Dynamic viral populations in hypersaline systems as revealed by metagenomic assembly.
Virus-host and CRISPR dynamics in Archaea-dominated hypersaline Lake Tyrrell, Victoria, Australia.
properties 
{...}
dbXrefs
sra-run  SRR402039SRR402041SRR402042SRR402043SRR402044SRR402045SRR402046SRR402047
sra-submission  SRA049612
biosample  SAMN00778943SAMN00778944SAMN00778946SAMN00778947SAMN00778948SAMN00778949SAMN00778950SAMN00778945
sra-study  SRP010564
sra-sample  SRS290205SRS290206SRS290208SRS290209SRS290210SRS290211SRS290212SRS290207
sra-experiment  SRX117679SRX117680SRX117682SRX117683SRX117684SRX117685SRX117686SRX117681
distribution JSONJSON-LD
Download
bioproject.xml  HTTPS FTP
status public
visibility unrestricted-access
dateCreated 2012-01-22T00:00:00Z
dateModified 2012-01-22T00:00:00Z
datePublished 2015-01-28T00:00:00Z