home > bioproject > PRJNA82237
identifier PRJNA82237
type bioproject
sameAs
organism Trachemys scripta elegans
title Trachemys scripta elegans embryonic transcriptome
description RNA was isolated from two Trachemys scripta (red-eared slider turtle) embryos (stage 14 and 17) in order to generate a T. scripta developmental transcriptome. mRNAs were reverse transcribed and the resulting cDNA pool was sequenced using an Illumina HiSeq 2000 generating 18.8Gb of sequence. Transcripts were assembled using Trinity (http://trinityrnaseq.sourceforge.net/) and annotated using Blast2GO (http://www.blast2go.com).
data type Transcriptome or Gene expression
organization
publication
The Embryonic Transcriptome of the Red-Eared Slider Turtle (Trachemys scripta).
external link
Kaplinsky lab at Swarthmore College
properties 
{...}
dbXrefs
sra-run  SRR412530
sra-submission  SRA049718
biosample  SAMN00791481
sra-study  SRP011009
sra-sample  SRS294596
sra-experiment  SRX121294
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status public
visibility unrestricted-access
dateCreated 2012-01-28T00:00:00Z
dateModified 2012-01-28T00:00:00Z
datePublished