home > biosample > SAMD00003567
identifier SAMD00003567
type biosample
sameAs
sra-sample  DRS012352
organism marine metagenome
attributes
sample_name  DRS012352
env_biome  Temperate shelf and sea biome
collection_date  2012-04-16T11:00:00+09:00
env_feature  marine habitat
geo_loc_name  Japan:Monbetsu-shi:Kaiyokoen
lat_lon  44.337 143.380833
env_material  sea water
project_name  Monbetsu18S
depth  0 meter
env_package  water
investigation_type  metagenome
sample comment  1 L of surface seawaters were taken by a plastic bucket on Apr. 16 in 2012 from Okhotsk Sea (Monbetsu city, Japan) (44d20.22'N, 143d22.85'E). To trap all plankton components appeared in the seawaters, 500 mL of the seawaters were filtrated on 8 um pore-size polycarbonate filters (nuclepore membrane, GE Healthcare, Tokyo, Japan), and seawaters which passed through 8 um filter were further filtrated on 1 um pore-size (GE Healthcare). The filters were stored at a deep freezer (-80 degrees Celsius) until use.
submitted_to_insdc  true
target_gene  18S rRNA
seq_meth  pyrosequencing
properties 
{...}
dbXrefs
bioproject  PRJDB1919
sra-run  DRR014059
sra-submission  DRA001151
sra-study  DRP001207
sra-sample  DRS012352
sra-experiment  DRX012596
distribution JSONJSON-LD
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ddbj_biosample_set.xml.gz  HTTPS FTP
status public
visibility unrestricted-access
dateCreated 2014-05-12T01:17:49+09:00
dateModified 2014-11-12T08:28:28+09:00
datePublished 2014-09-01T15:00:00+09:00