identifier
SAMD00005503
type
biosample
sameAs
sra-sample
DRS008999
organism
Mus musculus
title
10238-104A4
description
attributes
sample_name
DRS008999
age
P30
sex
male
disease
Rett Syndrome
rna_sample_type
total RNA
sample comment
visual cortex - wildtype, neonate N30, donor1
sample_provider
Michela Fagiolini/Alka Saxena/Piero Carninci
stage
postnatal day 30
Ontology ID
FF:10238-104A4
tissue
Visual cortex
cell_line
N/A
cell_type
mixed
ethnicity
N/A
experimental_condition
age matched P30 wildtype sibling-1
rna_extraction_protocol
Total RNA Trizol Qiagen minElute
rna_od_260_230
2.14
rna_od_260_280
2.1
properties
1{
2  "access": "public",
3  "publication_date": "2014-03-28T00:00:00+09:00",
4  "last_update": "2014-11-12T17:28:59+09:00",
5  "Ids": {
6    "Id": [
7      {
8        "is_primary": "1",
9        "namespace": "BioSample",
10        "content": "SAMD00005503"
11      },
12      {
13        "namespace": "SRA",
14        "content": "DRS008999"
15      }
16    ]
17  },
18  "Description": {
19    "SampleName": "DRS008999",
20    "Title": "10238-104A4",
21    "Organism": {
22      "taxonomy_id": "10090",
23      "OrganismName": "Mus musculus"
24    }
25  },
26  "Owner": {
27    "Name": {
28      "abbreviation": "RIKEN Omics Science Center, Yokohama Institute, RIKEN",
29      "content": "RIKEN Omics Science Center, Yokohama Institute, RIKEN"
30    }
31  },
32  "Models": {
33    "Model": [
34      {
35        "content": "Generic"
36      }
37    ]
38  },
39  "Attributes": {
40    "Attribute": [
41      {
42        "attribute_name": "sample_name",
43        "content": "DRS008999"
44      },
45      {
46        "attribute_name": "age",
47        "content": "P30"
48      },
49      {
50        "attribute_name": "sex",
51        "content": "male"
52      },
53      {
54        "attribute_name": "disease",
55        "content": "Rett Syndrome"
56      },
57      {
58        "attribute_name": "rna_sample_type",
59        "content": "total RNA"
60      },
61      {
62        "attribute_name": "sample comment",
63        "content": "visual cortex - wildtype, neonate N30, donor1"
64      },
65      {
66        "attribute_name": "sample_provider",
67        "content": "Michela Fagiolini/Alka Saxena/Piero Carninci"
68      },
69      {
70        "attribute_name": "stage",
71        "content": "postnatal day 30"
72      },
73      {
74        "attribute_name": "Ontology ID",
75        "content": "FF:10238-104A4"
76      },
77      {
78        "attribute_name": "tissue",
79        "content": "Visual cortex"
80      },
81      {
82        "attribute_name": "cell_line",
83        "content": "N/A"
84      },
85      {
86        "attribute_name": "cell_type",
87        "content": "mixed"
88      },
89      {
90        "attribute_name": "ethnicity",
91        "content": "N/A"
92      },
93      {
94        "attribute_name": "experimental_condition",
95        "content": "age matched P30 wildtype sibling-1"
96      },
97      {
98        "attribute_name": "rna_extraction_protocol",
99        "content": "Total RNA Trizol Qiagen minElute"
100      },
101      {
102        "attribute_name": "rna_od_260_230",
103        "content": "2.14"
104      },
105      {
106        "attribute_name": "rna_od_260_280",
107        "content": "2.1"
108      }
109    ]
110  }
111}
dbXref
sra-experiment
DRX009136
sra-run
DRR010010
sra-sample
DRS008999
taxonomy
10090
download
SAMD00005503.json
HTTPS
status
public
visibility
unrestricted-access
dateCreated
2014-05-12T01:17:49Z
dateModified
2014-11-12T08:28:28Z
datePublished
2014-03-27T15:00:00Z
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