home > biosample > SAMD00080950
identifier SAMD00080950
type biosample
sameAs
sra-sample  DRS074549
organism Aquitalea magnusonii
attributes
sample_name  Genome Aquitalea magnusonii strain H3
biomaterial_provider  Hidehiro Ishizawa
bioproject_id  PRJDB5811
biotic_relationship  symbiont
collection_date  2015-08-27
depth  0.3
env_broad_scale  Wetland
env_local_scale  Pond
env_medium  water
estimated_size  450000000
extrachrom_elements  1
geo_loc_name  Japan
growth_med  liquid
host  Lemna minor
host_taxid  4472
infra_specific_name  RDSC 5512
infra_specific_rank  clone
isol_growth_condt  10.1186/s13068-017-0746-8
lat_lon  34.47 N 135.30 E
life_stage  frond
locus_tag_prefix  DLM
mineral_nutr_regm  10% LB medium
num_replicons  1
oxy_stat_samp  aerobic
plant_body_site  root or frond
project_name  Analysis of whole genome sequence of Aquitalea magnusonii H3
ref_biomaterial  10.1186/s13068-017-0746-8
rel_to_oxygen  aerobe
samp_collect_device  10% LB medium with 1.5% agar
samp_mat_process  successively cultured in 10% LB medium containing 1.5% agar
samp_store_dur  2 years
samp_store_loc  laboratory
samp_store_temp  -80
strain  H3
tot_mass  80 fronds
trophic_level  heterotroph
properties 
{...}
dbXrefs
bioproject  PRJDB5811
sra-run  DRR148418
sra-submission  DRA007231
sra-study  DRP004414
sra-sample  DRS074549
sra-experiment  DRX139169
distribution JSONJSON-LD
Download
ddbj_biosample_set.xml.gz  HTTPS FTP
status public
visibility unrestricted-access
dateCreated 2017-05-25T13:03:08+09:00
dateModified 2022-04-05T08:48:13+09:00
datePublished 2017-06-22T00:32:54+09:00