| attributes |
| ENA first public |
2011-12-06 |
| ENA last update |
2018-03-09 |
| ENA-CHECKLIST |
GSC:MIxS v2.1 |
| ENA-KEYWORD |
GSC, MIxS, MIMARKS |
| External Id |
SAMEA1035289 |
| Geographic location (country:region,area) |
France |
| INSDC center alias |
University of Geneva |
| INSDC center name |
University of Geneva |
| INSDC first public |
2011-12-06T11:09:10Z |
| INSDC last update |
2018-03-09T09:55:15Z |
| INSDC status |
public |
| Submitter Id |
july_09_1533m_A |
| collection date |
2009-07-16 |
| elevation |
1533 |
| enviornmental package |
host-associated |
| environment (biome) |
Temperate broadleaf and mixed forest biome ENVO:00000876 |
| environment (feature) |
plant-associated habitat ENVO:00009001 |
| environment (material) |
phyllosphere |
| geographic location (latitude) |
42.8925 |
| geographic location (longitude) |
-0.0725 |
| host common name |
European beech |
| host taxid |
28930 |
| investigation type |
MIMARKS |
| multiplex identifiers |
GCAGC |
| pcr conditions |
initial denaturation:95degC_5min; 30 cycles of denaturation:95degC_30sec; annealing=54degC_1min; extension=72degC_1min30sec; final extension=72degC_10min |
| pcr primers |
ITS2 : CGTATCGCCTCCCTCGCGCCATCAGGCAGCGCTGCGTTCTTCATCGATGC ITS1F : CTATGCGCCTTGCCAGCCCGCTCAGATCGCCTTGGTCATTTAGAGGAAGTAA |
| plant body site |
adult vascular leaf PO:0006340 |
| project name |
gradient_pyrenees |
| sample name |
july_09_1533m_A |
| sequencing method |
Pyrosequencing |
| target gene |
ITS1-ITS2 |
|