home > biosample > SAMEA104591744
identifier SAMEA104591744
type biosample
sameAs
sra-sample  ERS2203026
organism human gut metagenome
attributes
ENA first public  2018-02-15
ENA last update  2018-02-14
ENA-CHECKLIST  ERC000011
External Id  SAMEA104591744
INSDC center alias  UCSDMI
INSDC center name  University of California San Diego Microbiome Initiative
INSDC first public  2018-02-15T17:08:31Z
INSDC last update  2018-02-14T18:26:51Z
INSDC status  public
Submitter Id  qiita_sid_10317:10317.000001542
acid_reflux  Unspecified
acne medication  false
acne_medication_otc  false
add_adhd  Unspecified
age cat  40s
age years  43
age_corrected  43
alcohol consumption  true
alcohol_frequency  Occasionally (1-2 times/week)
alcohol_types  Unspecified
alcohol_types_beercider  No
alcohol_types_red_wine  false
alcohol_types_sour_beers  false
alcohol_types_spiritshard_alcohol  false
alcohol_types_unspecified  true
alcohol_types_white_wine  false
allergic to i have no food allergies that i know of  false
allergic_to  Unspecified
allergic_to_other  false
allergic_to_peanuts  false
allergic_to_shellfish  false
allergic_to_tree_nuts  false
allergic_to_unspecified  true
alzheimers  Unspecified
anonymized name  000001542
antibiotic_history  Year
appendix_removed  false
artificial_sweeteners  Unspecified
asd  Unspecified
assigned_from_geo  Yes
autoimmune  Unspecified
birth year  1970
bmi  23.14
bmi_cat  Normal
bmi_corrected  23.14
body habitat  UBERON:feces
body product  UBERON:feces
body site  UBERON:feces
bowel_movement_frequency  Unspecified
bowel_movement_quality  Unspecified
breastmilk_formula_ensure  Unspecified
cancer  Unspecified
cancer treatment  Unspecified
cardiovascular_disease  Unspecified
cat  false
cdiff  Unspecified
census_region  West
chickenpox  Unspecified
clinical condition  Unspecified
collection date  05/07/2013
collection month  May
collection season  Spring
collection time  16:35
collection_timestamp  2013-05-07 16:35
consume_animal_products_abx  Unspecified
contraceptive  No
cosmetics_frequency  Daily
country  USA
country of birth  United States
country_residence  Unspecified
csection  false
deodorant_use  I do not use deodorant or an antiperspirant
depression_bipolar_schizophrenia  Unspecified
diabetes  I do not have this condition
diabetes type  Unspecified
diet type  Omnivore
dna_extracted  true
dog  true
dominant hand  Unspecified
drinking_water_source  City
drinks_per_session  Unspecified
economic_region  Rocky Mountain
elevation  1619.8
env biome  dense settlement biome
env feature  human-associated habitat
env package  human-gut
env_material  feces
epilepsy_or_seizure_disorder  Unspecified
exercise_frequency  Occasionally (1-2 times/week)
exercise_location  Depends on the season
fed_as_infant  Unspecified
fermented_plant_frequency  Unspecified
flossing_frequency  Occasionally (1-2 times/week)
flu_vaccine_date  Year
frozen_dessert_frequency  Unspecified
fruit_frequency  Unspecified
fungal_overgrowth  Unspecified
geo loc name  USA:CO
gluten  No
height cm  165
height_units  centimeters
high_fat_red_meat_frequency  Unspecified
homecooked_meals_frequency  Unspecified
host common name  human
host subject id  87e16cddbb0a93efea155a71eb3b61e1a0a832658a6156bfab49b20e507e6a23d3d21f5e6d55dd916b8c657b1bce8b2ae4a0762145d12e31b1a88e00b6163b3e
host taxid  9606
ibd  I do not have this condition
ibd diagnosis  Unspecified
ibd_diagnosis_refined  Unspecified
ibs  Unspecified
kidney_disease  Unspecified
lactose  No
last_move  Unspecified
last_travel  1 year
latitude  40
level_of_education  Unspecified
liver_disease  Unspecified
livingwith  No
longitude  -105.2
lowgrain_diet_type  Unspecified
lung disease  I do not have this condition
meat_eggs_frequency  Unspecified
mental_illness  Unspecified
mental_illness_type  Unspecified
mental_illness_type_anorexia_nervosa  Unspecified
mental_illness_type_bipolar_disorder  Unspecified
mental_illness_type_bulimia_nervosa  Unspecified
mental_illness_type_depression  Unspecified
mental_illness_type_ptsd_posttraumatic_stress_disorder  Unspecified
mental_illness_type_schizophrenia  Unspecified
mental_illness_type_substance_abuse  Unspecified
mental_illness_type_unspecified  Unspecified
migraine  I do not have this condition
milk_cheese_frequency  Unspecified
milk_substitute_frequency  Unspecified
multivitamin  No
nail_biter  Yes
non_food_allergies  Unspecified
non_food_allergies_beestings  No
non_food_allergies_drug_eg_penicillin  No
non_food_allergies_pet_dander  No
non_food_allergies_poison_ivyoak  No
non_food_allergies_sun  No
non_food_allergies_unspecified  Yes
olive_oil  Unspecified
one_liter_of_water_a_day_frequency  Unspecified
other_supplement_frequency  No
pets_other  Unspecified
physical_specimen_location  UCSDMI
physical_specimen_remaining  Yes
pku  I do not have this condition
pool_frequency  Rarely (a few times/month)
poultry_frequency  Unspecified
pregnant  No
prepared_meals_frequency  Unspecified
probiotic_frequency  Unspecified
public  Yes
race  Caucasian
ready_to_eat_meals_frequency  Unspecified
red_meat_frequency  Unspecified
roommates  One
roommates_in_study  Unspecified
salted_snacks_frequency  Unspecified
sample name  qiita_sid_10317:10317.000001542
sample type  Stool
seafood_frequency  Unspecified
seasonal_allergies  Unspecified
sex  female
sibo  Unspecified
skin_condition  I do not have this condition
sleep_duration  7-8 hours
smoking_frequency  Never
softener  No
specialized_diet  Unspecified
specialized_diet_exclude_dairy  Unspecified
specialized_diet_exclude_nightshades  Unspecified
specialized_diet_exclude_refined_sugars  Unspecified
specialized_diet_fodmap  Unspecified
specialized_diet_halaal  Unspecified
specialized_diet_i_do_not_eat_a_specialized_diet  Unspecified
specialized_diet_kosher  Unspecified
specialized_diet_modified_paleo_diet  Unspecified
specialized_diet_other_restrictions_not_described_here  Unspecified
specialized_diet_paleodiet_or_primal_diet  Unspecified
specialized_diet_raw_food_diet  Unspecified
specialized_diet_unspecified  Unspecified
specialized_diet_westenprice_or_other_lowgrain_low_processed_fo  Unspecified
state  CO
subset_age  true
subset_antibiotic_history  false
subset_bmi  true
subset_diabetes  true
subset_healthy  false
subset_ibd  true
sugar_sweetened_drink_frequency  Unspecified
sugary_sweets_frequency  Unspecified
survey_id  7efeb86b2bd40df6
teethbrushing_frequency  Daily
thyroid  Unspecified
tonsils_removed  No
types_of_plants  6 to 10
vegetable_frequency  Unspecified
vitamin_b_supplement_frequency  Unspecified
vitamin_d_supplement_frequency  Unspecified
vivid_dreams  Unspecified
weight kg  63
weight_change  Remained stable
weight_units  kilograms
whole_eggs  Unspecified
whole_grain_frequency  Unspecified
properties 
{...}
dbXrefs
bioproject  PRJEB11419
sra-run  ERR2303800
sra-submission  ERA1210070
sra-study  ERP012803
sra-sample  ERS2203026
sra-experiment  ERX2355128
distribution JSONJSON-LD
Download
biosample_set.xml.gz  HTTPS FTP
status public
visibility unrestricted-access
dateCreated 2018-02-20T15:10:21Z
dateModified 2021-08-20T23:41:56Z
datePublished 2018-02-15T00:00:00Z