home > biosample > SAMEA104591747
identifier SAMEA104591747
type biosample
sameAs
sra-sample  ERS2203029
organism human gut metagenome
attributes
ENA first public  2018-02-15
ENA last update  2018-02-14
ENA-CHECKLIST  ERC000011
External Id  SAMEA104591747
INSDC center alias  UCSDMI
INSDC center name  University of California San Diego Microbiome Initiative
INSDC first public  2018-02-15T17:08:31Z
INSDC last update  2018-02-14T18:26:52Z
INSDC status  public
Submitter Id  qiita_sid_10317:10317.000022223
acid_reflux  I do not have this condition
acne medication  false
acne_medication_otc  false
add_adhd  I do not have this condition
age cat  30s
age years  34
age_corrected  34
alcohol consumption  false
alcohol_frequency  Never
alcohol_types  Unspecified
alcohol_types_beercider  No
alcohol_types_red_wine  false
alcohol_types_sour_beers  false
alcohol_types_spiritshard_alcohol  false
alcohol_types_unspecified  true
alcohol_types_white_wine  false
allergic to i have no food allergies that i know of  true
allergic_to  Unspecified
allergic_to_other  false
allergic_to_peanuts  false
allergic_to_shellfish  false
allergic_to_tree_nuts  false
allergic_to_unspecified  false
alzheimers  I do not have this condition
anonymized name  000022223
antibiotic_history  6 months
appendix_removed  false
artificial_sweeteners  Never
asd  I do not have this condition
assigned_from_geo  Yes
autoimmune  Diagnosed by a medical professional (doctor, physician assistant)
birth year  1983
bmi  19.28
bmi_cat  Normal
bmi_corrected  19.28
body habitat  UBERON:feces
body product  UBERON:feces
body site  UBERON:feces
bowel_movement_frequency  One
bowel_movement_quality  I tend to have diarrhea (watery stool) - Type 5, 6 and 7
breastmilk_formula_ensure  false
cancer  I do not have this condition
cancer treatment  Unspecified
cardiovascular_disease  I do not have this condition
cat  false
cdiff  I do not have this condition
census_region  Unspecified
chickenpox  No
clinical condition  I do not have this condition
collection date  2017-10-29
collection month  October
collection season  Fall
collection time  10:15
collection_timestamp  2017-10-29 10:15
consume_animal_products_abx  Not sure
contraceptive  No
cosmetics_frequency  Never
country  Australia
country of birth  Australia
country_residence  Australia
csection  false
deodorant_use  I use deodorant
depression_bipolar_schizophrenia  Unspecified
diabetes  I do not have this condition
diabetes type  Unspecified
diet type  Omnivore
dna_extracted  true
dog  false
dominant hand  I am right handed
drinking_water_source  Bottled
drinks_per_session  Unspecified
economic_region  Unspecified
elevation  Unspecified
env biome  dense settlement biome
env feature  human-associated habitat
env package  human-gut
env_material  feces
epilepsy_or_seizure_disorder  I do not have this condition
exercise_frequency  Occasionally (1-2 times/week)
exercise_location  Outdoors
fed_as_infant  Primarily breast milk
fermented_plant_frequency  Never
flossing_frequency  Rarely (a few times/month)
flu_vaccine_date  Month
frozen_dessert_frequency  Never
fruit_frequency  Daily
fungal_overgrowth  I do not have this condition
geo loc name  Australia:Unspecified
gluten  No
height cm  185
height_units  centimeters
high_fat_red_meat_frequency  Never
homecooked_meals_frequency  Daily
host common name  human
host subject id  cbbf8c110f963b53e4935f26877aa7c6f6ebaf4c2d28fb47c41149811e9f70d7ff478cd09f5bf6bc18a19cf0192f10b95ea46c064fe14b73f4c2144ccff4f4d6
host taxid  9606
ibd  Diagnosed by a medical professional (doctor, physician assistant)
ibd diagnosis  Ulcerative colitis
ibd_diagnosis_refined  Ulcerative colitis
ibs  I do not have this condition
kidney_disease  I do not have this condition
lactose  No
last_move  I have lived in my current state of residence for more than a year.
last_travel  I have not been outside of my country of residence in the past year.
latitude  Unspecified
level_of_education  Bachelor's degree
liver_disease  I do not have this condition
livingwith  No
longitude  Unspecified
lowgrain_diet_type  Unspecified
lung disease  I do not have this condition
meat_eggs_frequency  Regularly (3-5 times/week)
mental_illness  No
mental_illness_type  Unspecified
mental_illness_type_anorexia_nervosa  No
mental_illness_type_bipolar_disorder  No
mental_illness_type_bulimia_nervosa  No
mental_illness_type_depression  No
mental_illness_type_ptsd_posttraumatic_stress_disorder  No
mental_illness_type_schizophrenia  No
mental_illness_type_substance_abuse  No
mental_illness_type_unspecified  Yes
migraine  I do not have this condition
milk_cheese_frequency  Never
milk_substitute_frequency  Never
multivitamin  Yes
nail_biter  No
non_food_allergies  Unspecified
non_food_allergies_beestings  No
non_food_allergies_drug_eg_penicillin  No
non_food_allergies_pet_dander  No
non_food_allergies_poison_ivyoak  No
non_food_allergies_sun  No
non_food_allergies_unspecified  Yes
olive_oil  Daily
one_liter_of_water_a_day_frequency  Daily
other_supplement_frequency  No
pets_other  No
physical_specimen_location  UCSDMI
physical_specimen_remaining  Yes
pku  I do not have this condition
pool_frequency  Rarely (a few times/month)
poultry_frequency  Never
pregnant  No
prepared_meals_frequency  Rarely (less than once/week)
probiotic_frequency  Daily
public  Yes
race  Caucasian
ready_to_eat_meals_frequency  Never
red_meat_frequency  Never
roommates_in_study  No
salted_snacks_frequency  Daily
sample name  qiita_sid_10317:10317.000022223
sample type  Stool
seafood_frequency  Regularly (3-5 times/week)
seasonal_allergies  No
sex  male
sibo  I do not have this condition
skin_condition  I do not have this condition
sleep_duration  7-8 hours
smoking_frequency  Never
softener  No
specialized_diet  Unspecified
specialized_diet_exclude_dairy  Yes
specialized_diet_exclude_nightshades  No
specialized_diet_exclude_refined_sugars  Yes
specialized_diet_fodmap  No
specialized_diet_halaal  No
specialized_diet_i_do_not_eat_a_specialized_diet  No
specialized_diet_kosher  No
specialized_diet_modified_paleo_diet  No
specialized_diet_other_restrictions_not_described_here  No
specialized_diet_paleodiet_or_primal_diet  No
specialized_diet_raw_food_diet  No
specialized_diet_unspecified  No
specialized_diet_westenprice_or_other_lowgrain_low_processed_fo  No
state  Unspecified
subset_age  true
subset_antibiotic_history  false
subset_bmi  true
subset_diabetes  true
subset_healthy  false
subset_ibd  false
sugar_sweetened_drink_frequency  Never
sugary_sweets_frequency  Never
survey_id  06bca903ca929258
teethbrushing_frequency  Daily
thyroid  I do not have this condition
tonsils_removed  No
types_of_plants  11 to 20
vegetable_frequency  Daily
vitamin_b_supplement_frequency  Never
vitamin_d_supplement_frequency  Daily
vivid_dreams  Never
weight kg  66
weight_change  Remained stable
weight_units  kilograms
whole_eggs  Rarely (less than once/week)
whole_grain_frequency  Never
properties 
{...}
dbXrefs
bioproject  PRJEB11419
sra-run  ERR2303803
sra-submission  ERA1210070
sra-study  ERP012803
sra-sample  ERS2203029
sra-experiment  ERX2355131
distribution JSONJSON-LD
Download
biosample_set.xml.gz  HTTPS FTP
status public
visibility unrestricted-access
dateCreated 2018-02-20T15:10:21Z
dateModified 2021-08-20T23:41:54Z
datePublished 2018-02-15T00:00:00Z