home > biosample > SAMEA104598859
identifier SAMEA104598859
type biosample
sameAs
sra-sample  ERS2210141
organism human gut metagenome
attributes
ENA first public  2018-02-17
ENA last update  2018-02-16
ENA-CHECKLIST  ERC000011
External Id  SAMEA104598859
INSDC center alias  UCSDMI
INSDC center name  University of California San Diego Microbiome Initiative
INSDC first public  2018-02-17T17:05:12Z
INSDC last update  2018-02-16T18:58:57Z
INSDC status  public
Submitter Id  qiita_sid_10317:10317.000033543
acid_reflux  I do not have this condition
acne medication  No
acne_medication_otc  No
add_adhd  I do not have this condition
age cat  teen
age years  17
age_corrected  17
alcohol consumption  Yes
alcohol_frequency  Rarely (a few times/month)
alcohol_types  Unspecified
alcohol_types_beercider  No
alcohol_types_red_wine  Yes
alcohol_types_sour_beers  No
alcohol_types_spiritshard_alcohol  No
alcohol_types_unspecified  No
alcohol_types_white_wine  Yes
allergic to i have no food allergies that i know of  No
allergic_to  Unspecified
allergic_to_other  No
allergic_to_peanuts  No
allergic_to_shellfish  Yes
allergic_to_tree_nuts  No
allergic_to_unspecified  No
alzheimers  I do not have this condition
anonymized name  000033543
antibiotic_history  Year
appendix_removed  No
artificial_sweeteners  Never
asd  I do not have this condition
assigned_from_geo  Yes
autoimmune  I do not have this condition
birth year  2000
bmi  20.94
bmi_cat  Normal
bmi_corrected  20.94
body habitat  UBERON:feces
body product  UBERON:feces
body site  UBERON:feces
bowel_movement_frequency  Two
bowel_movement_quality  I tend to have normal formed stool - Type 3 and 4
breastmilk_formula_ensure  No
cancer  I do not have this condition
cancer treatment  Unspecified
cardiovascular_disease  I do not have this condition
cat  Yes
cdiff  I do not have this condition
census_region  Unspecified
chickenpox  Yes
clinical condition  I do not have this condition
collection date  08/10/2017
collection month  August
collection season  Summer
collection time  09:50
collection_timestamp  08/10/2017 09:50
consume_animal_products_abx  Not sure
contraceptive  No
cosmetics_frequency  Regularly (3-5 times/week)
country  United Kingdom
country of birth  United Kingdom
country_residence  United Kingdom
csection  No
deodorant_use  I use an antiperspirant
depression_bipolar_schizophrenia  Unspecified
diabetes  I do not have this condition
diabetes type  Unspecified
diet type  Omnivore
dna_extracted  Yes
dog  No
dominant hand  I am right handed
drinking_water_source  Filtered
drinks_per_session  1
economic_region  Unspecified
elevation  Unspecified
env biome  dense settlement biome
env feature  human-associated habitat
env package  human-gut
env_material  feces
epilepsy_or_seizure_disorder  I do not have this condition
exercise_frequency  Occasionally (1-2 times/week)
exercise_location  Both
fed_as_infant  A mixture of breast milk and formula
fermented_plant_frequency  Never
flossing_frequency  Rarely (a few times/month)
flu_vaccine_date  I have not gotten the flu vaccine in the past year.
frozen_dessert_frequency  Rarely (less than once/week)
fruit_frequency  Never
fungal_overgrowth  I do not have this condition
geo loc name  United Kingdom:Unspecified
gluten  No
height cm  165
height_units  centimeters
high_fat_red_meat_frequency  Never
homecooked_meals_frequency  Regularly (3-5 times/week)
host common name  human
host subject id  88d23aacee5df6380085871367bc59d90ec6796e9eefbe246420a89540021a436ecfee3b36e278c179085b05c0dd346bab416892fd64245a65f364c1cebd2a2f
host taxid  9606
ibd  I do not have this condition
ibd diagnosis  Unspecified
ibd_diagnosis_refined  Unspecified
ibs  I do not have this condition
kidney_disease  I do not have this condition
lactose  No
last_move  I have lived in my current state of residence for more than a year.
last_travel  Month
latitude  Unspecified
level_of_education  High School or GED equilivant
liver_disease  I do not have this condition
livingwith  Yes
longitude  Unspecified
lowgrain_diet_type  Unspecified
lung disease  I do not have this condition
meat_eggs_frequency  Daily
mental_illness  No
mental_illness_type  Unspecified
mental_illness_type_anorexia_nervosa  No
mental_illness_type_bipolar_disorder  No
mental_illness_type_bulimia_nervosa  No
mental_illness_type_depression  No
mental_illness_type_ptsd_posttraumatic_stress_disorder  No
mental_illness_type_schizophrenia  No
mental_illness_type_substance_abuse  No
mental_illness_type_unspecified  Yes
migraine  Self-diagnosed
milk_cheese_frequency  Regularly (3-5 times/week)
milk_substitute_frequency  Never
multivitamin  No
nail_biter  No
non_food_allergies  Unspecified
non_food_allergies_beestings  No
non_food_allergies_drug_eg_penicillin  No
non_food_allergies_pet_dander  No
non_food_allergies_poison_ivyoak  No
non_food_allergies_sun  No
non_food_allergies_unspecified  Yes
olive_oil  Daily
one_liter_of_water_a_day_frequency  Daily
other_supplement_frequency  No
pets_other  Yes
physical_specimen_location  UCSDMI
physical_specimen_remaining  Yes
pku  I do not have this condition
pool_frequency  Rarely (a few times/month)
poultry_frequency  Occasionally (1-2 times/week)
pregnant  No
prepared_meals_frequency  Rarely (less than once/week)
probiotic_frequency  Never
public  Yes
race  Caucasian
ready_to_eat_meals_frequency  Never
red_meat_frequency  Rarely (less than once/week)
roommates_in_study  No
salted_snacks_frequency  Rarely (less than once/week)
sample name  qiita_sid_10317:10317.000033543
sample type  Stool
seafood_frequency  Rarely (less than once/week)
seasonal_allergies  No
sex  female
sibo  I do not have this condition
skin_condition  I do not have this condition
sleep_duration  8 or more hours
smoking_frequency  Never
softener  No
specialized_diet  Unspecified
specialized_diet_exclude_dairy  No
specialized_diet_exclude_nightshades  No
specialized_diet_exclude_refined_sugars  No
specialized_diet_fodmap  No
specialized_diet_halaal  No
specialized_diet_i_do_not_eat_a_specialized_diet  No
specialized_diet_kosher  No
specialized_diet_modified_paleo_diet  No
specialized_diet_other_restrictions_not_described_here  No
specialized_diet_paleodiet_or_primal_diet  No
specialized_diet_raw_food_diet  No
specialized_diet_unspecified  Yes
specialized_diet_westenprice_or_other_lowgrain_low_processed_fo  No
state  Unspecified
subset_age  false
subset_antibiotic_history  false
subset_bmi  true
subset_diabetes  true
subset_healthy  false
subset_ibd  true
sugar_sweetened_drink_frequency  Never
sugary_sweets_frequency  Rarely (less than once/week)
survey_id  a8462ace46ae6d74
teethbrushing_frequency  Daily
thyroid  I do not have this condition
tonsils_removed  No
types_of_plants  6 to 10
vegetable_frequency  Rarely (less than once/week)
vitamin_b_supplement_frequency  Never
vitamin_d_supplement_frequency  Never
vivid_dreams  Rarely (a few times/month)
weight kg  57
weight_change  Remained stable
weight_units  kilograms
whole_eggs  Regularly (3-5 times/week)
whole_grain_frequency  Occasionally (1-2 times/week)
properties 
{...}
dbXrefs
bioproject  PRJEB11419
sra-run  ERR2306093
sra-submission  ERA1216077
sra-study  ERP012803
sra-sample  ERS2210141
sra-experiment  ERX2357403
distribution JSONJSON-LD
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biosample_set.xml.gz  HTTPS FTP
status public
visibility unrestricted-access
dateCreated 2018-02-20T15:11:47Z
dateModified 2021-08-20T23:45:54Z
datePublished 2018-02-17T00:00:00Z