home > biosample > SAMEA2673225
identifier SAMEA2673225
type biosample
sameAs
sra-sample  ERS514160
organism uncultured archaeon
attributes
ENA first public  2014-09-27
ENA last update  2016-10-21
ENA-CHECKLIST  ERC000024
External Id  SAMEA2673225
INSDC center alias  VTT
INSDC center name  VTT Technical Research Centre of Finland
INSDC first public  2014-09-27T17:04:05Z
INSDC last update  2016-10-21T09:43:58Z
INSDC status  public
Submitter Id  OL-KR23A
adapters  CGTATCGCCTCCCTCGCGCCATCAG, CTATGCGCCTTGCCAGCCCGCTCAG
alkalinity  0.28
calcium  2100
chloride  7930
collection date  2009-12-15
conductivity  2190
environment (biome)  aquifer
environment (feature)  saline groundwater
environment (material)  water
geographic location (country and/or sea)  Finland
geographic location (depth)  347
geographic location (latitude)  61.23694444
geographic location (longitude)  21.44083333
geographic location (region and locality)  Olkiluoto
investigation type  metagenome
magnesium  0.002
multiplex identifiers  ACTCAG
nucleic acid extraction  MoBio Power water RNA extraction kit
organism count  250000 / ml
oxygenation status of sample  anaerobic
pcr primers  ACGGGGCGCAGCAGGCGCGA, CCCGGGTATCTAATCC
ph  7.5
project name  DeepOlki
sample collection device or method  pumping
sample material processing  concentration by filtration
sample name  OL-KR23A
sample volume or weight for DNA extraction  1000
sequencing method  454 Titanium
source material identifiers  groundwater
water environmental package  water
properties 
{...}
dbXrefs
bioproject  PRJEB6874
sra-run  ERR571288
sra-submission  ERA337217
sra-study  ERP006516
sra-sample  ERS514160
sra-experiment  ERX530277
distribution JSONJSON-LD
Download
biosample_set.xml.gz  HTTPS FTP
status public
visibility unrestricted-access
dateCreated 2014-09-28T08:05:46Z
dateModified 2021-08-21T03:14:24Z
datePublished 2014-09-27T00:00:00Z