home > biosample > SAMEA2673229
identifier SAMEA2673229
type biosample
sameAs
sra-sample  ERS514164
organism uncultured archaeon
attributes
ENA first public  2014-09-27
ENA last update  2016-10-21
ENA-CHECKLIST  ERC000024
External Id  SAMEA2673229
INSDC center alias  VTT
INSDC center name  VTT Technical Research Centre of Finland
INSDC first public  2014-09-27T17:04:05Z
INSDC last update  2016-10-21T09:43:58Z
INSDC status  public
Submitter Id  OL-KR49A
adapters  CGTATCGCCTCCCTCGCGCCATCAG, CTATGCGCCTTGCCAGCCCGCTCAG
alkalinity  0.16
calcium  2700
chloride  9940
collection date  2009-12-14
conductivity  2670
environment (biome)  aquifer
environment (feature)  saline groundwater
environment (material)  water
geographic location (country and/or sea)  Finland
geographic location (depth)  415
geographic location (latitude)  61.23694444
geographic location (longitude)  21.44083333
geographic location (region and locality)  Olkiluoto
investigation type  metagenome
magnesium  0.0008
multiplex identifiers  TACATA
nucleic acid extraction  MoBio Power water RNA extraction kit
organism count  15000 / ml
oxygenation status of sample  anaerobic
pcr primers  ACGGGGCGCAGCAGGCGCGA, CCCGGGTATCTAATCC
ph  8.1
project name  DeepOlki
sample collection device or method  pumping
sample material processing  concentration by filtration
sample name  OL-KR49A
sample volume or weight for DNA extraction  1000
sequencing method  454 Titanium
source material identifiers  groundwater
water environmental package  water
properties 
{...}
dbXrefs
bioproject  PRJEB6874
sra-run  ERR571292
sra-submission  ERA337217
sra-study  ERP006516
sra-sample  ERS514164
sra-experiment  ERX530281
distribution JSONJSON-LD
Download
biosample_set.xml.gz  HTTPS FTP
status public
visibility unrestricted-access
dateCreated 2014-09-28T08:05:47Z
dateModified 2021-08-21T03:14:24Z
datePublished 2014-09-27T00:00:00Z