home > biosample > SAMEA2674924
identifier SAMEA2674924
type biosample
sameAs
sra-sample  ERS515439
organism uncultured bacterium
attributes
ENA first public  2014-09-27
ENA last update  2016-10-21
ENA-CHECKLIST  ERC000022
External Id  SAMEA2674924
INSDC center alias  VTT
INSDC center name  VTT Technical Research Centre of Finland
INSDC first public  2014-09-27T17:04:03Z
INSDC last update  2016-10-21T09:33:21Z
INSDC status  public
Submitter Id  Peat-50-100cm-B
annotation source  GreeneGenes
collection date  2013-06-15
current land use  Natura 2000 and National Mire Conservation Programme
current vegetation  cotton grass (Eriophorum vaginatum), heather, cloudberry, cranberry, Sphagnum fuscum, bog rosemary, bog bilberry, crowberry, Cladina stellari, Cladonia sp., Cetraria islandica and Dicranum sp.
depth  0.5
environment (biome)  raised bog
environment (feature)  bog core
environment (material)  peat
geographic location (country and/or sea)  Finland
geographic location (elevation)  44
geographic location (latitude)  61.291912
geographic location (longitude)  21.839473
geographic location (region and locality)  Lastensuo
investigation type  metagenome
pcr primers  AGAGTTTGATCCTGGCTCAG, ATTACCGCGGCTGCTGG
ph  3.1
project name  Raised bog bacteria
sample collection device or method  15 cm diameter peat auger
sample material processing  freezing in sterile 50 ml plastic test tubes
sample name  Peat-50-100cm-B
sample volume or weight for DNA extraction  0.55
sequencing method  454
soil environmental package  soil
total organic C method  loss on ignition
total organic carbon  995
water content  0.89
properties 
{...}
dbXrefs
bioproject  PRJEB6875
sra-run  ERR571468
sra-submission  ERA338468
sra-study  ERP006517
sra-sample  ERS515439
sra-experiment  ERX530456
distribution JSONJSON-LD
Download
biosample_set.xml.gz  HTTPS FTP
status public
visibility unrestricted-access
dateCreated 2014-09-28T08:05:51Z
dateModified 2021-08-21T03:15:08Z
datePublished 2014-09-27T00:00:00Z