home > biosample > SAMEA3500518
identifier SAMEA3500518
type biosample
sameAs
sra-sample  ERS807667
organism plant metagenome
attributes
ENA first public  2015-08-19
ENA last update  2018-03-09
ENA-CHECKLIST  ERC000011
External Id  SAMEA3500518
INSDC center alias  CCME-COLORADO
INSDC center name  Colorado Center for Microbial Ecology, University of Colorado at Boulder
INSDC first public  2015-08-19T17:01:23Z
INSDC last update  2018-03-09T13:28:56Z
INSDC status  public
Submitter Id  qiime_ppdid_523:10245.104.Drnum11.day79.Bag4
altitude  0
ammonium  30
anonymized name  104.Drnum11.day79.Bag4
assigned_from_geo  y
bagnum  4
boron  15.7
calcium  0.847
cellulose  22.4
collection number  104
collection_timestamp  1/1/59 0:00
common name  plant metagenome
copper  6.8
day_count  79
depth  0
dna_extracted  true
drnum  11
elevation  104
env biome  ENVO:tropical moist broadleaf forest biome
env feature  ENVO:plant-associated habitat
env matter  ENVO:organic material
geographic location (country and/or sea)  Peru: GAZ
host common name  Protium subserratum
host subject id  104.Drnum11
host taxid  246857
humidity  97
iron  46.8
latitude  -3.733333
lignin_ash  48.2
lignin_ash_cellulose_ratio  2.151785714
lignin_ash_n_ratio  19.91735537
lignin_no_ash  47.9
lignin_no_ash_cellulose_ratio  2.138392857
lignin_no_ash_n_ratio  19.79338843
longitude  -73.25
magnesium  0.268
manganese  122.7
nitrogen  2.42
phosphate  150
phosphorus  0.094
physical_specimen_location  UC Berkeley
physical_specimen_remaining  false
plant body site  PO:leaflet
plant product  litter
position  Ground
potassium  0.2
public  y
required_sample_info_status  completed
sample location  ANL
sample name  qiime_ppdid_523:10245.104.Drnum11.day79.Bag4
sample type  leaf litter
sample_progress  sequenced 16S
sulfur  2120
temp  28.3
texture_0_to_40cm  16.8% clay, 74.9% sand, 8.3% silt
texture_40_to_80cm  17.1% clay, 73% sand, 10.8% silt
texture_80_to_120cm  14.9% clay, 74.3% sand, 10.8% silt
wind speed  0
zinc  27.7
properties 
{...}
dbXrefs
bioproject  PRJEB10233
sra-run  ERR978475
sra-submission  ERA464941
sra-study  ERP011456
sra-sample  ERS807667
sra-experiment  ERX1055336
distribution JSONJSON-LD
Download
biosample_set.xml.gz  HTTPS FTP
status public
visibility unrestricted-access
dateCreated 2015-08-21T14:06:40Z
dateModified 2021-08-21T06:59:22Z
datePublished 2015-08-19T00:00:00Z