home > biosample > SAMEA3630286
identifier SAMEA3630286
type biosample
sameAs
sra-sample  ERS937435
organism human skin metagenome
attributes
ENA first public  2015-12-17
ENA last update  2018-03-09
ENA-CHECKLIST  ERC000011
External Id  SAMEA3630286
INSDC center alias  UCSDMI
INSDC center name  University of California San Diego Microbiome Initiative
INSDC first public  2015-12-17T13:48:34Z
INSDC last update  2018-03-09T13:32:38Z
INSDC status  public
Submitter Id  qiita_sid_10142:10142.009.3.1.2013.Skin.PBS.LHip.CW
add_0c  23.6356
add_4c  5.9027
add_5c  0
add_6c  0
body site  LHip
collection date  3.1.2013
collection_date_unformat  3.1.2013
collection_timestamp  3/1/13 0:00
common name  human skin metagenome
corrected_sample_site  LHip
date_body_site_sample_for_ph  009.3.1.2013.skin.Lft.Hip.CW
days_since_placement  3
dewpt_c_average  -0.1936
dewpt_c_max  2.5
dewpt_c_min  -3.2
dna_extracted  true
exper_sample_group_days  2_SHSU_Feb.skin.torso.3
experiment  2_SHSU_Feb
host subject id  9
host taxid  9606
include_pmi_analysis  true
individual_human_id_sample_group  9.skin.torso
individual_humanid  9
latitude  30.71308
longitude  -95.55
lpressure_inch_hg_low  29.8592
multiple_torso_limb_sites  skin.torso.LHip
original_order  456
physical_specimen_location  UCSDMI
physical_specimen_remaining  true
pool_name_16s  MBF_v4_2
pool_name_18s  MBF_EUK_2
pre_post_rupture  pre
present_deep_sequencing  009.3.1.2013.Skin.PBS.LHip.CW
pressure_inch_hg_ave  29.93
pressure_inch_hg_high  30.0098
rain_mm_average  0
rain_mm_max  0
rain_mm_min  0
rain_mm_sum  0
rh_percent_average  65.2681
rh_percent_max  92.6
rh_percent_min  34
sam_houston_sample_id_modified  2013.009.3.CW
sam_houston_sample_id_value  2013.009.3.CW
sample group  skin.torso
sample location  left_hip
sample name  qiita_sid_10142:10142.009.3.1.2013.Skin.PBS.LHip.CW
sample no  CW
sample type  skin
sample_group_allskin_allab  skin
sample_type_skin_type  skin.PBS
sample_type_skin_type_days_since_placement  skin.PBS.3
sample_type_skin_type_soil_ctrl  skin.PBS.NA
sequencecount  544723
soil type  pine_forest
soil_control  false
soil_resample  skin.torso
soil_type_control  pine_forest.no
soil_type_control_experiment  pine_forest.no.2_SHSU_Feb
solar_radiation_w_m2_average  150.583
solar_radiation_w_m2_min  0.6
temp_c_average  7.0094
temp_c_max  16.939
temp_c_min  -2.073
properties 
{...}
dbXrefs
bioproject  PRJEB11485
sra-run  ERR1085716ERR1087575ERR1092007ERR1157411
sra-submission  ERA526114ERA526118ERA526435ERA540995
sra-study  ERP012879
sra-sample  ERS937435
sra-experiment  ERX1165285ERX1167144ERX1171561ERX1230818
distribution JSONJSON-LD
Download
biosample_set.xml.gz  HTTPS FTP
status public
visibility unrestricted-access
dateCreated 2015-12-19T08:15:26Z
dateModified 2021-08-21T08:23:36Z
datePublished 2015-12-17T00:00:00Z