home > biosample > SAMEA3670298
identifier SAMEA3670298
type biosample
sameAs
sra-sample　 ERS977447
organism soil metagenome
attributes
ENA first public　 2016-01-16
ENA last update　 2016-10-21
ENA-CHECKLIST　 ERC000022
External Id　 SAMEA3670298
INSDC center alias　 Swiss Federal Research Institute WSL
INSDC center name　 Swiss Federal Research Institute WSL
INSDC first public　 2016-01-16T17:03:32Z
INSDC last update　 2016-10-21T09:34:08Z
INSDC status　 public
Submitter Id　 PS01
collection date　 2013-09-23
depth　 1.6
environment (biome)　 alpine cryosphere
environment (feature)　 permafrost habitat
environment (material)　 soil
geographic location (country and/or sea)　 Switzerland
geographic location (elevation)　 2960
geographic location (latitude)　 46.49633659
geographic location (longitude)　 9.931472421
investigation type　 metagenome
mean annual and seasonal precipitation　 1500
mean annual and seasonal temperature　 -3
nucleic acid extraction　 MoBio
pcr primers　 CCTAYGGGDBGCWSCAG/GGACTACNVGGGTHTCTAAT
ph　 7.46
project name　 Muot da Barba Peider Permafrost
sample name　 PS01
sequencing method　 Illumina MiSeq v3 PE300
slope aspect　 NW
soil environmental package　 soil
target gene　 SSU rRNA
target subfragment　 V3-V4
texture　 85/11/4
properties　▽ 
{...}
dbXrefs
bioproject　 PRJEB11799
sra-run　 ERR1141762
sra-submission　 ERA535307
sra-study　 ERP013208
sra-sample　 ERS977447
sra-experiment　 ERX1220611
distribution JSONJSON-LD
Download
biosample_set.xml.gz　 HTTPS FTP
status public
visibility unrestricted-access
dateCreated 2016-01-17T11:05:06Z
dateModified 2021-08-21T08:48:14Z
datePublished 2016-01-16T00:00:00Z