home > biosample > SAMEA3670301
identifier SAMEA3670301
type biosample
sameAs
sra-sample　 ERS977450
organism soil metagenome
attributes
ENA first public　 2016-01-16
ENA last update　 2016-10-21
ENA-CHECKLIST　 ERC000022
External Id　 SAMEA3670301
INSDC center alias　 Swiss Federal Research Institute WSL
INSDC center name　 Swiss Federal Research Institute WSL
INSDC first public　 2016-01-16T17:03:32Z
INSDC last update　 2016-10-21T09:34:08Z
INSDC status　 public
Submitter Id　 PS04
collection date　 2013-09-23
depth　 1.6
environment (biome)　 alpine cryosphere
environment (feature)　 permafrost habitat
environment (material)　 soil
geographic location (country and/or sea)　 Switzerland
geographic location (elevation)　 2960
geographic location (latitude)　 46.49587773
geographic location (longitude)　 9.932285399
investigation type　 metagenome
mean annual and seasonal precipitation　 1500
mean annual and seasonal temperature　 -3
nucleic acid extraction　 MoBio
pcr primers　 CCTAYGGGDBGCWSCAG/GGACTACNVGGGTHTCTAAT
ph　 4.77
project name　 Muot da Barba Peider Permafrost
sample name　 PS04
sequencing method　 Illumina MiSeq v3 PE300
slope aspect　 SE
soil environmental package　 soil
target gene　 SSU rRNA
target subfragment　 V3-V4
texture　 85/13/2
properties　▽ 
{...}
dbXrefs
bioproject　 PRJEB11799
sra-run　 ERR1141765
sra-submission　 ERA535307
sra-study　 ERP013208
sra-sample　 ERS977450
sra-experiment　 ERX1220614
distribution JSONJSON-LD
Download
biosample_set.xml.gz　 HTTPS FTP
status public
visibility unrestricted-access
dateCreated 2016-01-17T11:05:07Z
dateModified 2021-08-21T08:48:15Z
datePublished 2016-01-16T00:00:00Z