| ENA first public |
2015-12-03 |
| ENA last update |
2017-08-10 |
| ENA-CHECKLIST |
ERC000011 |
| External Id |
SAMEA3686672 |
| INSDC center alias |
UCSDMI |
| INSDC center name |
University of California San Diego Microbiome Initiative |
| INSDC first public |
2015-12-03T17:01:23Z |
| INSDC last update |
2017-08-10T13:53:18Z |
| INSDC status |
public |
| Submitter Id |
qiita_sid_10317:10317.000011026 |
| acid_reflux |
Not provided |
| acne medication |
false |
| acne_medication_otc |
true |
| add_adhd |
I do not have this condition |
| age cat |
40s |
| age years |
46 |
| age_corrected |
46 |
| alcohol consumption |
true |
| alcohol_frequency |
Occasionally (1-2 times/week) |
| alcohol_types |
Not provided |
| alcohol_types_beercider |
false |
| alcohol_types_red_wine |
true |
| alcohol_types_sour_beers |
false |
| alcohol_types_spiritshard_alcohol |
false |
| alcohol_types_unspecified |
false |
| alcohol_types_white_wine |
true |
| allergic to i have no food allergies that i know of |
true |
| allergic_to |
Not provided |
| allergic_to_other |
false |
| allergic_to_peanuts |
false |
| allergic_to_shellfish |
false |
| allergic_to_tree_nuts |
false |
| allergic_to_unspecified |
false |
| alzheimers |
I do not have this condition |
| anonymized name |
000011026 |
| antibiotic_history |
I have not taken antibiotics in the past year. |
| appendix_removed |
false |
| artificial_sweeteners |
Not provided |
| asd |
I do not have this condition |
| autoimmune |
Not provided |
| birth year |
1969 |
| bmi |
23.49 |
| bmi_cat |
Normal |
| bmi_corrected |
Not provided |
| body habitat |
UBERON:feces |
| body product |
UBERON:feces |
| body site |
UBERON:feces |
| bowel_movement_frequency |
Not provided |
| bowel_movement_quality |
I tend to have normal formed stool |
| breastmilk_formula_ensure |
false |
| cancer |
Not provided |
| cancer treatment |
Not provided |
| cardiovascular_disease |
I do not have this condition |
| cat |
false |
| cdiff |
I do not have this condition |
| census_region |
South |
| chickenpox |
Yes |
| clinical condition |
I do not have this condition |
| collection date |
09/03/2015 |
| collection month |
September |
| collection season |
Fall |
| collection time |
22:00 |
| collection_timestamp |
2015-09-03 22:00 |
| consume_animal_products_abx |
No |
| contraceptive |
No |
| cosmetics_frequency |
Rarely (a few times/month) |
| country |
USA |
| country of birth |
United States |
| country_residence |
Not provided |
| csection |
true |
| deodorant_use |
I use deodorant |
| depression_bipolar_schizophrenia |
I do not have this condition |
| diabetes |
I do not have this condition |
| diabetes type |
Not provided |
| diet type |
Omnivore |
| dna_extracted |
true |
| dog |
false |
| dominant hand |
I am right handed |
| drinking_water_source |
City |
| drinks_per_session |
Not provided |
| economic_region |
Mideast |
| elevation |
76.2 |
| env biome |
dense settlement biome |
| env feature |
human-associated habitat |
| env package |
human-gut |
| env_material |
feces |
| epilepsy_or_seizure_disorder |
I do not have this condition |
| exercise_frequency |
Regularly (3-5 times/week) |
| exercise_location |
Indoors |
| fed_as_infant |
Primarily breast milk |
| fermented_plant_frequency |
Rarely (less than once/week) |
| flossing_frequency |
Daily |
| flu_vaccine_date |
I have not gotten the flu vaccine in the past year. |
| frozen_dessert_frequency |
Rarely (less than once/week) |
| fruit_frequency |
Regularly (3-5 times/week) |
| fungal_overgrowth |
I do not have this condition |
| geo loc name |
USA |
| gluten |
I do not eat gluten because it makes me feel bad |
| has_physical_specimen |
true |
| height cm |
170 |
| height_units |
centimeters |
| high_fat_red_meat_frequency |
Occasionally (1-2 times/week) |
| homecooked_meals_frequency |
Daily |
| host common name |
human |
| host subject id |
63ae8bec1a23dca0b17088e32853481738551f40063d9cf2918c5b1f1967f242520ef823d317fd9cc21c9cbc6cad84ce6566f71c0082b7544f54dac0b07a8155 |
| host taxid |
9606 |
| ibd |
I do not have this condition |
| ibd diagnosis |
Not provided |
| ibd_diagnosis_refined |
Not provided |
| ibs |
I do not have this condition |
| kidney_disease |
I do not have this condition |
| lactose |
true |
| last_move |
I have lived in my current state of residence for more than a year. |
| last_travel |
1 year |
| latitude |
39 |
| level_of_education |
Bachelor's degree |
| liver_disease |
I do not have this condition |
| livingwith |
Yes |
| longitude |
-77.1 |
| lowgrain_diet_type |
true |
| lung disease |
I do not have this condition |
| meat_eggs_frequency |
Daily |
| mental_illness |
Not provided |
| mental_illness_type |
Not provided |
| mental_illness_type_anorexia_nervosa |
Not provided |
| mental_illness_type_bipolar_disorder |
Not provided |
| mental_illness_type_bulimia_nervosa |
Not provided |
| mental_illness_type_depression |
Not provided |
| mental_illness_type_ptsd_posttraumatic_stress_disorder |
Not provided |
| mental_illness_type_schizophrenia |
Not provided |
| mental_illness_type_substance_abuse |
Not provided |
| mental_illness_type_unspecified |
Not provided |
| migraine |
I do not have this condition |
| milk_cheese_frequency |
Never |
| milk_substitute_frequency |
Regularly (3-5 times/week) |
| multivitamin |
false |
| nail_biter |
false |
| non_food_allergies |
Not provided |
| non_food_allergies_beestings |
false |
| non_food_allergies_drug_eg_penicillin |
false |
| non_food_allergies_pet_dander |
false |
| non_food_allergies_poison_ivyoak |
false |
| non_food_allergies_sun |
false |
| non_food_allergies_unspecified |
true |
| olive_oil |
Daily |
| one_liter_of_water_a_day_frequency |
Daily |
| other_supplement_frequency |
Not provided |
| pets_other |
Not provided |
| physical_specimen_location |
UCSDMI |
| physical_specimen_remaining |
true |
| pku |
I do not have this condition |
| pool_frequency |
Never |
| poultry_frequency |
Regularly (3-5 times/week) |
| pregnant |
false |
| prepared_meals_frequency |
Occasionally (1-2 times/week) |
| probiotic_frequency |
Rarely (a few times/month) |
| public |
true |
| race |
Caucasian |
| ready_to_eat_meals_frequency |
Never |
| red_meat_frequency |
Occasionally (1-2 times/week) |
| roommates_in_study |
No |
| salted_snacks_frequency |
Occasionally (1-2 times/week) |
| sample name |
qiita_sid_10317:10317.000011026 |
| sample type |
Stool |
| seafood_frequency |
Occasionally (1-2 times/week) |
| seasonal_allergies |
false |
| sex |
female |
| sibo |
I do not have this condition |
| skin_condition |
I do not have this condition |
| sleep_duration |
7-8 hours |
| smoking_frequency |
Never |
| softener |
false |
| specialized_diet |
Not provided |
| specialized_diet_exclude_dairy |
Not provided |
| specialized_diet_exclude_nightshades |
Not provided |
| specialized_diet_exclude_refined_sugars |
Not provided |
| specialized_diet_fodmap |
Not provided |
| specialized_diet_halaal |
Not provided |
| specialized_diet_i_do_not_eat_a_specialized_diet |
Not provided |
| specialized_diet_kosher |
Not provided |
| specialized_diet_modified_paleo_diet |
Not provided |
| specialized_diet_other_restrictions_not_described_here |
Not provided |
| specialized_diet_paleodiet_or_primal_diet |
Not provided |
| specialized_diet_raw_food_diet |
Not provided |
| specialized_diet_unspecified |
Not provided |
| specialized_diet_westenprice_or_other_lowgrain_low_processed_fo |
Not provided |
| state |
MD |
| subset_age |
true |
| subset_antibiotic_history |
true |
| subset_bmi |
true |
| subset_diabetes |
true |
| subset_healthy |
true |
| subset_ibd |
true |
| sugar_sweetened_drink_frequency |
Never |
| sugary_sweets_frequency |
Regularly (3-5 times/week) |
| survey_id |
10d5cdc88bf6a09e |
| teethbrushing_frequency |
Daily |
| thyroid |
I do not have this condition |
| tonsils_removed |
false |
| types_of_plants |
Not provided |
| vegetable_frequency |
Daily |
| vioscreen_a_bev |
0.5595068529999999 |
| vioscreen_a_cal |
69.4648491 |
| vioscreen_acesupot |
0 |
| vioscreen_activity_level |
Not provided |
| vioscreen_add_sug |
7.025890277 |
| vioscreen_addsugar |
33.80441192 |
| vioscreen_adsugtot |
30.96180972 |
| vioscreen_age |
215 |
| vioscreen_alanine |
5.073259578 |
| vioscreen_alcohol |
8.73380846 |
| vioscreen_alcohol_servings |
0.5595100000000001 |
| vioscreen_alphacar |
3053.454795 |
| vioscreen_alphtoce |
14.82394585 |
| vioscreen_alphtoco |
13.42457593 |
| vioscreen_arginine |
6.015288554 |
| vioscreen_ash |
20.98433085 |
| vioscreen_aspartam |
0 |
| vioscreen_aspartic |
9.218382786 |
| vioscreen_avcarb |
166.13951200000002 |
| vioscreen_bcodeid |
Not provided |
| vioscreen_betacar |
14280.33014 |
| vioscreen_betacryp |
272.9744435 |
| vioscreen_betaine |
77.33215968 |
| vioscreen_betatoco |
0.385397255 |
| vioscreen_biochana |
0.009726027 |
| vioscreen_bmi |
Not provided |
| vioscreen_caffeine |
309.2237586 |
| vioscreen_calcium |
Not provided |
| vioscreen_calcium_avg |
Not provided |
| vioscreen_calcium_dose |
Not provided |
| vioscreen_calcium_freq |
Not provided |
| vioscreen_calcium_from_dairy_servings |
0.05775 |
| vioscreen_calcium_servings |
1.9009599999999998 |
| vioscreen_calories |
1785.960959 |
| vioscreen_carbo |
197.11271399999998 |
| vioscreen_cholest |
292.1695848 |
| vioscreen_choline |
444.69242289999994 |
| vioscreen_clac9t11 |
0.034767125 |
| vioscreen_clat10c12 |
0.010547946 |
| vioscreen_copper |
1.47331543 |
| vioscreen_coumest |
0.293178067 |
| vioscreen_cystine |
1.284657434 |
| vioscreen_d_cheese |
0.001315068 |
| vioscreen_d_milk |
0.056438352000000004 |
| vioscreen_d_tot_soym |
0.057753419 |
| vioscreen_d_total |
0.057753419 |
| vioscreen_d_yogurt |
0 |
| vioscreen_daidzein |
1.316246555 |
| vioscreen_database |
NDSR - V44 |
| vioscreen_delttoco |
1.86616445 |
| vioscreen_discfat_oil |
25.77618793 |
| vioscreen_discfat_sol |
19.76893194 |
| vioscreen_dob |
1/1/1800 |
| vioscreen_eer |
Not provided |
| vioscreen_email |
Not provided |
| vioscreen_erythr |
0.005232877 |
| vioscreen_f_citmlb |
1.418246502 |
| vioscreen_f_nj_citmlb |
1.090739713 |
| vioscreen_f_nj_other |
1.360328653 |
| vioscreen_f_nj_total |
2.451040775 |
| vioscreen_f_other |
1.360328653 |
| vioscreen_f_total |
2.778575155 |
| vioscreen_fat |
69.39224636 |
| vioscreen_fiber |
30.93594285 |
| vioscreen_fibh2o |
9.754710911 |
| vioscreen_fibinso |
21.43536895 |
| vioscreen_finished |
8/30/15 |
| vioscreen_fish_servings |
2.3734599999999997 |
| vioscreen_fol_deqv |
441.99678939999995 |
| vioscreen_fol_nat |
382.94841610000003 |
| vioscreen_fol_syn |
34.71128799 |
| vioscreen_formontn |
0.0023287670000000003 |
| vioscreen_fried_fish_servings |
0 |
| vioscreen_fried_food_servings |
0.21095999999999998 |
| vioscreen_frt5_day |
3.4 |
| vioscreen_frtsumm |
5.6 |
| vioscreen_fructose |
23.25770013 |
| vioscreen_fruit_servings |
3 |
| vioscreen_g_nwhl |
1.380958871 |
| vioscreen_g_total |
3.3271782030000003 |
| vioscreen_g_whl |
1.9462193319999999 |
| vioscreen_galactos |
0.19627395 |
| vioscreen_gammtoco |
12.28624518 |
| vioscreen_gender |
false |
| vioscreen_genistn |
1.755150531 |
| vioscreen_glac |
77.92065497 |
| vioscreen_gltc |
86.63687928 |
| vioscreen_glucose |
22.43550808 |
| vioscreen_glutamic |
15.429698199999999 |
| vioscreen_glycine |
4.479260087 |
| vioscreen_glycitn |
0.33589042799999996 |
| vioscreen_grams |
4042.043151 |
| vioscreen_hei2010_dairy |
0.2 |
| vioscreen_hei2010_empty_calories |
20 |
| vioscreen_hei2010_fatty_acids |
10 |
| vioscreen_hei2010_fruit |
5 |
| vioscreen_hei2010_greens_beans |
5 |
| vioscreen_hei2010_protien_foods |
5 |
| vioscreen_hei2010_refined_grains |
10 |
| vioscreen_hei2010_score |
81.8 |
| vioscreen_hei2010_sea_foods_plant_protiens |
5 |
| vioscreen_hei2010_sodium |
4.3 |
| vioscreen_hei2010_veg |
5 |
| vioscreen_hei2010_whole_fruit |
5 |
| vioscreen_hei2010_whole_grains |
7.3 |
| vioscreen_hei_drk_g_org_veg_leg |
5 |
| vioscreen_hei_fruit |
5 |
| vioscreen_hei_grains |
3.1 |
| vioscreen_hei_meat_beans |
10 |
| vioscreen_hei_milk |
0.2 |
| vioscreen_hei_non_juice_frt |
5 |
| vioscreen_hei_oils |
10 |
| vioscreen_hei_sat_fat |
9.1 |
| vioscreen_hei_score |
79.1 |
| vioscreen_hei_sodium |
3.4 |
| vioscreen_hei_sol_fat_alc_add_sug |
19.7 |
| vioscreen_hei_veg |
5 |
| vioscreen_hei_whl_grains |
3.6 |
| vioscreen_height |
Not provided |
| vioscreen_histidin |
2.623287838 |
| vioscreen_inositol |
0.23594521300000001 |
| vioscreen_iron |
12.42482208 |
| vioscreen_isoleuc |
4.280164076 |
| vioscreen_isomalt |
0 |
| vioscreen_joules |
7472.458219 |
| vioscreen_juice_servings |
0.65504 |
| vioscreen_lactitol |
0 |
| vioscreen_lactose |
0.991506833 |
| vioscreen_legumes |
0.029232877 |
| vioscreen_leucine |
6.862437794 |
| vioscreen_line_gi |
451.2222603 |
| vioscreen_low_fat_dairy_serving |
0 |
| vioscreen_lutzeax |
8614.856849 |
| vioscreen_lycopene |
7824.955479000001 |
| vioscreen_lysine |
6.93731539 |
| vioscreen_m_egg |
0.590465765 |
| vioscreen_m_fish_hi |
0.713589018 |
| vioscreen_m_fish_lo |
0.638876719 |
| vioscreen_m_frank |
0.566164409 |
| vioscreen_m_meat |
1.140493147 |
| vioscreen_m_mpf |
7.532876712 |
| vioscreen_m_nutsd |
1.167232817 |
| vioscreen_m_organ |
0 |
| vioscreen_m_poult |
4.473726121 |
| vioscreen_m_soy |
0.09934246099999999 |
| vioscreen_magnes |
390.4446918 |
| vioscreen_maltitol |
0 |
| vioscreen_maltose |
1.614849435 |
| vioscreen_mangan |
4.980795163 |
| vioscreen_mannitol |
0.315561645 |
| vioscreen_methhis3 |
29.26287457 |
| vioscreen_methion |
2.206356352 |
| vioscreen_mfa141 |
0.037315068 |
| vioscreen_mfa161 |
1.061534223 |
| vioscreen_mfa181 |
27.93703179 |
| vioscreen_mfa201 |
0.384630177 |
| vioscreen_mfa221 |
0.111643836 |
| vioscreen_mfatot |
29.6752836 |
| vioscreen_multi_calcium_avg |
Not provided |
| vioscreen_multi_calcium_dose |
200 |
| vioscreen_multivitamin |
true |
| vioscreen_multivitamin_freq |
Less than once per week |
| vioscreen_natoco |
13.42457593 |
| vioscreen_nccglbr |
137.87665880000003 |
| vioscreen_nccglgr |
96.45122003 |
| vioscreen_niacin |
27.41761558 |
| vioscreen_niacineq |
44.46106593 |
| vioscreen_nitrogen |
15.23361783 |
| vioscreen_non_fried_fish_servings |
2.3734599999999997 |
| vioscreen_nutrient_recommendation |
Default |
| vioscreen_omega3 |
1.9233699430000002 |
| vioscreen_oxalic |
337.42395120000003 |
| vioscreen_oxalicm |
344.7674443 |
| vioscreen_pantothe |
7.18975412 |
| vioscreen_pectins |
5.6892604879999995 |
| vioscreen_pfa182 |
14.40947801 |
| vioscreen_pfa183 |
1.493424591 |
| vioscreen_pfa184 |
0.024054793999999997 |
| vioscreen_pfa204 |
0.269589045 |
| vioscreen_pfa205 |
0.096219175 |
| vioscreen_pfa225 |
0.067917806 |
| vioscreen_pfa226 |
0.24336986800000002 |
| vioscreen_pfatot |
16.7165213 |
| vioscreen_phenylal |
3.8426844769999997 |
| vioscreen_phosphor |
1208.5080480000001 |
| vioscreen_phytic |
750.513613 |
| vioscreen_pinitol |
0.0070136980000000005 |
| vioscreen_potass |
3811.6972600000004 |
| vioscreen_procdate |
10/28/15 |
| vioscreen_proline |
4.162493311 |
| vioscreen_protanim |
64.77209974 |
| vioscreen_protein |
93.91921019 |
| vioscreen_protocol |
Knight Lab, University of Colorado Boulder |
| vioscreen_protveg |
29.14758669 |
| vioscreen_questionnaire |
Egg White Standard Questionnaire (V3) |
| vioscreen_recno |
151 |
| vioscreen_retinol |
135.1438784 |
| vioscreen_rgrain |
1.214986305 |
| vioscreen_ribofla |
1.8844109519999999 |
| vioscreen_sacchar |
0 |
| vioscreen_salad_vegetable_servings |
2.7153099999999997 |
| vioscreen_satoco |
0 |
| vioscreen_selenium |
114.97851029999998 |
| vioscreen_serine |
3.969452322 |
| vioscreen_sfa100 |
0.13189040900000001 |
| vioscreen_sfa120 |
0.90986303 |
| vioscreen_sfa140 |
0.770630217 |
| vioscreen_sfa160 |
9.704465432000001 |
| vioscreen_sfa170 |
0.045589045 |
| vioscreen_sfa180 |
4.335233505 |
| vioscreen_sfa200 |
0.191808225 |
| vioscreen_sfa220 |
0.21172602399999998 |
| vioscreen_sfa40 |
0.026520548999999997 |
| vioscreen_sfa60 |
0.013424656 |
| vioscreen_sfa80 |
0.121315065 |
| vioscreen_sfatot |
16.6815617 |
| vioscreen_sodium |
2880.5876710000002 |
| vioscreen_sorbitol |
0.635561632 |
| vioscreen_srvid |
20550 |
| vioscreen_starch |
58.539586899999996 |
| vioscreen_started |
8/30/15 |
| vioscreen_subject_id |
Not provided |
| vioscreen_sucpoly |
0 |
| vioscreen_sucrlose |
0 |
| vioscreen_sucrose |
41.04440818 |
| vioscreen_sweet_servings |
0.80714 |
| vioscreen_tagatose |
0.9689041759999999 |
| vioscreen_tfa161t |
0.02509589 |
| vioscreen_tfa181t |
1.900520555 |
| vioscreen_tfa182t |
0.286191778 |
| vioscreen_tgrain |
3.361698684 |
| vioscreen_thiamin |
1.283479455 |
| vioscreen_threonin |
3.80747873 |
| vioscreen_time |
22 |
| vioscreen_totaltfa |
2.233999926 |
| vioscreen_totcla |
0.046712332 |
| vioscreen_totfolat |
417.6596747 |
| vioscreen_totsugar |
89.97102954 |
| vioscreen_tryptoph |
1.0234247909999998 |
| vioscreen_tyrosine |
3.0585753560000004 |
| vioscreen_user_id |
20550 |
| vioscreen_v_drkgr |
1.3363560509999999 |
| vioscreen_v_orange |
0.6753150840000001 |
| vioscreen_v_other |
0.9519726059999999 |
| vioscreen_v_potato |
0.17024657399999998 |
| vioscreen_v_starcy |
0.308657523 |
| vioscreen_v_tomato |
0.379698662 |
| vioscreen_v_total |
3.822383682 |
| vioscreen_valine |
4.604137347 |
| vioscreen_veg5_day |
7.4 |
| vioscreen_vegetable_servings |
4 |
| vioscreen_vegsumm |
7.6 |
| vioscreen_visit |
1 |
| vioscreen_vita_iu |
27020.14247 |
| vioscreen_vita_rae |
1463.77226 |
| vioscreen_vita_re |
2792.403425 |
| vioscreen_vitb12 |
2.96690423 |
| vioscreen_vitb6 |
2.5769318880000003 |
| vioscreen_vitc |
213.80492290000004 |
| vioscreen_vitd |
5.024191995 |
| vioscreen_vitd2 |
0 |
| vioscreen_vitd3 |
5.024191995 |
| vioscreen_vitd_iu |
200.9676798 |
| vioscreen_vite_iu |
20.00071169 |
| vioscreen_vitk |
428.5791524 |
| vioscreen_water |
3684.120548 |
| vioscreen_weight |
Not provided |
| vioscreen_wgrain |
2.146712463 |
| vioscreen_whole_grain_servings |
1.94622 |
| vioscreen_xylitol |
0.048630137000000004 |
| vioscreen_zinc |
10.94704222 |
| vitamin_b_supplement_frequency |
Never |
| vitamin_d_supplement_frequency |
Occasionally (1-2 times/week) |
| vivid_dreams |
Not provided |
| weight kg |
68 |
| weight_change |
Remained stable |
| weight_units |
kilograms |
| whole_eggs |
Regularly (3-5 times/week) |
| whole_grain_frequency |
Daily |