home > biosample > SAMEA3732541
identifier SAMEA3732541
type biosample
sameAs
sra-sample  ERS1039690
organism soil metagenome
attributes
ENA first public  2016-04-13
ENA last update  2017-12-04
ENA-CHECKLIST  ERC000022
External Id  SAMEA3732541
INSDC center alias  Cornell University
INSDC center name  Cornell University
INSDC first public  2016-04-13T17:04:32Z
INSDC last update  2017-12-04T09:19:05Z
INSDC status  public
Submitter Id  BR059F
climatic_zone  Csa, Mediterranean hot summer
collection date  2011-06-22
common name  pyrotag library
depth  0.1
environment (biome)  forest
environment (feature)  forest
environment (material)  soil
geographic location (country and/or sea)  USA
geographic location (elevation)  1135
geographic location (latitude)  39.55
geographic location (longitude)  -121.04
horizon  O horizon
investigation type  mimarks-survey
ltsp treatment  OM2
mean_annual_temperatuere_celsius  11.2
moisture content  45
multiplex identifiers  TCCTCCGCTTATTGATATGC
pcr primers  TACGCTGTCT
ph  5.88
project name  LTSP
sample name  BR059F
sample weight for DNA extraction  0.5
sequencing method  454
soil environmental package  soil
soil_classification  Mesic Ultic Haploxeralfs
target gene  ITS
target subfragment  ITS4F
tree_cover  Ponderosa pine, sugar pine, white fir, giant sequoia
properties 
{...}
dbXrefs
bioproject  PRJEB12501
sra-run  ERR1225815
sra-submission  ERA556376
sra-study  ERP013987
sra-sample  ERS1039690
sra-experiment  ERX1298027
distribution JSONJSON-LD
Download
biosample_set.xml.gz  HTTPS FTP
status public
visibility unrestricted-access
dateCreated 2016-04-14T09:07:57Z
dateModified 2021-08-21T09:47:52Z
datePublished 2016-04-13T00:00:00Z