ENA first public |
2016-07-08 |
ENA last update |
2016-07-07 |
ENA-CHECKLIST |
ERC000011 |
External Id |
SAMEA4067271 |
INSDC center alias |
UCSDMI |
INSDC center name |
University of California San Diego Microbiome Initiative |
INSDC first public |
2016-07-08T17:01:15Z |
INSDC last update |
2016-07-07T18:55:43Z |
INSDC status |
public |
Submitter Id |
qiita_sid_10145:10145.3rd.1C |
altitude |
0 |
anonymized name |
3rd-1C |
approx_distance_from_seawater_at_low_tide |
90 |
approx_distance_transect_start_to_highest_tide_line_meters |
5 |
area |
Calvert Island |
assigned_from_geo |
true |
bearing_degrees |
332 |
chlorophyll |
0.028 |
chlorophyll_method |
90 percent acetone extraction |
chlorophyll_units |
ug/g sand or ug/L |
collection_timestamp |
Missing: Not provided |
common name |
beach sand metagenome |
country |
Canada |
degree_of_saturation_percent |
39.87 |
depth |
0-.001 |
dna_ext_method |
collect microbes onto 0.22 um filter, extract with MoBio PowerSoil kit |
dna_extracted |
true |
elevation |
4.9 |
env biome |
marine benthic biome |
env feature |
high tide zone |
env matter |
beach sand |
env package |
soil |
extracted DNA avail now |
true |
g_sand_or_ml_sw_for_dna_extraction |
1.9 |
has_extracted_data |
true |
has_physical_specimen |
true |
host common name |
sand metagenome |
host subject id |
3rd-1C |
host taxid |
1671699 |
latitude |
51.65 |
longitude |
-128.15 |
moisture content |
0.104 |
moisture_content_meth |
dry at 110degC |
moisture_content_units |
gH2O/gsand |
nh4_n |
0.27 |
nh4_n_meth |
2N KCl Extractable |
nh4_n_units |
mg/kg |
no3_n |
< 0.05 |
no3_n_meth |
2N KCl Extractable |
no3_n_units |
mg/kg |
organic_matter_meth |
LOI at 450 degC |
organic_matter_percent |
0.26 |
physical_specimen_location |
UBC |
physical_specimen_remaining |
true |
po4_p |
1.5 |
po4_p_meth |
Bray P-1 |
po4_p_units |
mg per kg |
public |
true |
required_sample_info_status |
complete |
sample name |
qiita_sid_10145:10145.3rd.1C |
sample type |
beach sand |
sand_grain_method |
shake sand through sieves |
sand_grains_between_106_and_45um_percent |
0.11 |
sand_grains_between_250_and_106um_percent |
28.04 |
sand_grains_between_355_and_250um_percent |
53.73 |
sand_grains_greater_than_355um_percent |
18.12 |
sand_grains_less_than_45um_percent |
0 |
seawater_or_pore_water_ph_meth |
pH meter |
seawater_or_pore_water_salinity_meth |
refractrometer |
sediment_ph |
8.68 |
sediment_ph_meth |
20g dry sand + 20ml dH2O, shake, let sit ~30mins; pH meter |
sediment_salinity |
4.5 |
sediment_salinity_meth |
20g dry sand + 20ml dH2O, shake, let sit ~30mins; conductivity meter |
sediment_salinity_units |
ppt |
slope aspect |
North west |
temp |
15.6 |
weather |
Overcast to partly cloudy |