home > biosample > SAMEA4067322
identifier SAMEA4067322
type biosample
sameAs
sra-sample  ERS1238432
organism seawater metagenome
attributes
ENA first public  2016-07-08
ENA last update  2016-07-07
ENA-CHECKLIST  ERC000011
External Id  SAMEA4067322
INSDC center alias  UCSDMI
INSDC center name  University of California San Diego Microbiome Initiative
INSDC first public  2016-07-08T17:01:15Z
INSDC last update  2016-07-07T18:55:45Z
INSDC status  public
Submitter Id  qiita_sid_10145:10145.NB.5C
altitude  0
anonymized name  NB-5C
approx_distance_from_seawater_at_low_tide  0
approx_distance_transect_start_to_highest_tide_line_meters  90
area  Calvert Island
assigned_from_geo  true
bearing_degrees  348
chlorophyll  3.409
chlorophyll_method  90 percent acetone extraction
chlorophyll_units  ug/g sand or ug/L
collection_timestamp  Missing: Not provided
common name  seawater metagenome
country  Canada
depth  0
dna_ext_method  collect microbes onto 0.22 um filter, extract with MoBio PowerSoil kit
dna_extracted  true
elevation  0
env biome  marine benthic biome
env feature  high tide zone
env matter  sea water
env package  water
extracted DNA avail now  true
g_sand_or_ml_sw_for_dna_extraction  50
has_extracted_data  true
has_physical_specimen  true
host common name  seawater metagenome
host subject id  NB-5C
host taxid  1671699
latitude  51.66
longitude  -128.14
moisture_content_units  gH2O/gsand
nh4_n  Missing: Not provided
nh4_n_meth  2N KCl Extractable
nh4_n_units  mg/kg
no3_n  Missing: Not provided
no3_n_meth  2N KCl Extractable
no3_n_units  mg/kg
organic_matter_meth  Missing: Not provided
organic_matter_percent  Missing: Not provided
physical_specimen_location  UBC
physical_specimen_remaining  true
po4_p  Missing: Not provided
po4_p_meth  Bray P-1
po4_p_units  mg per kg
public  true
required_sample_info_status  complete
sample name  qiita_sid_10145:10145.NB.5C
sample type  sea water
seawater_or_pore_water_ph  8.34
seawater_or_pore_water_ph_meth  pH meter
seawater_or_pore_water_salinity  33.5
seawater_or_pore_water_salinity_meth  refractrometer
sediment_ph  Not applicableN
sediment_salinity_units  ppt
temp  10.2
weather  rain
properties 
{...}
dbXrefs
bioproject  PRJEB14727
sra-run  ERR1519990ERR1520114
sra-submission  ERA673813ERA673820
sra-study  ERP016392
sra-sample  ERS1238432
sra-experiment  ERX1590958ERX1591082
distribution JSONJSON-LD
Download
biosample_set.xml.gz  HTTPS FTP
status public
visibility unrestricted-access
dateCreated 2016-07-12T08:08:39Z
dateModified 2021-08-21T12:27:09Z
datePublished 2016-07-08T00:00:00Z