home > biosample > SAMEA4076081
identifier SAMEA4076081
type biosample
sameAs
sra-sample　 ERS1247191
organism bird metagenome
attributes
ENA first public　 2016-07-13
ENA last update　 2016-07-13
ENA-CHECKLIST　 ERC000011
External Id　 SAMEA4076081
INSDC center alias　 UCSDMI
INSDC center name　 University of California San Diego Microbiome Initiative
INSDC first public　 2016-07-13T17:01:27Z
INSDC last update　 2016-07-13T01:14:58Z
INSDC status　 public
Submitter Id　 qiita_sid_1632:1632.E1D08.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
altitude　 0
anonymized name　 E1D08
arcsine_fledge_success_brood　 Missing: Not collected
arcsine_fledge_success_clutch　 Missing: Not collected
arcsine_hatching_success　 Missing: Not collected
area　 Charches
assigned_from_geo　 true
backup　 false
bird_family　 Cuculidae
bird_order　 Cuculiformes
broken_eggs　 Missing: Not collected
brood_size　 Missing: Not collected
clutch_size　 2
code_id_statistica　 215
coll_date_juliane_days　 106
collection date　 4/17/07 0:00
collection_timestamp　 4/17/07
common name　 organismal metagenome
country　 GAZ:Spain
country_nation　 Spain
country_region　 Hoya de Guadix
culturing_date　 4/19/07
depth　 0
dna_extracted　 true
elevation　 1310
empo_0　 EMP sample
empo_1　 Host-associated
empo_2　 Animal
empo_3　 Animal surface
enterobacteriaceae_density　 0
enterococcus_density　 0
env biome　 mediterranean shrubland biome
env feature　 nest of bird
env matter　 egg
env package　 host-associated
eppendorf_name　 CC19E.3
estefania_plates　 1D08
extracted DNA avail now　 true
feathers　 false
fledge_success_brood　 Missing: Not collected
fledge_success_clutch　 Missing: Not collected
fledging_date　 Missing: Not collected
geo loc name　 Spain:Hoya de Guadix
hatching_date　 Missing: Not collected
hatching_success　 Missing: Not collected
hatching_synchrony　 asyn
host common name　 Great-spotted cuckoo
host scientific name　 Cuculiformes
host subject id　 Crialo.cc19e.1
host taxid　 78203
latitude　 37.28454722
lay_date_juliane_days　 Missing: Not provided
laying_date　 Missing: Not provided
log_enterobacteriaceae_density　 0
log_enterococcus_density　 0
log_mesophiles_density　 0.107124135
log_rel_growth_enterobact　 2.448315191
log_rel_growth_enterococcus　 0.301029996
log_rel_growth_mesophiles　 -0.107124135
log_rel_growth_staphylococcus　 -0.107124135
log_staphylococcus_density　 0.107124135
longitude　 -2.985819444
mesophiles_density　 0.279747043
nest_type　 open
number_fledging　 Missing: Not provided
number_sampled_eggs　 2
observer　 Juan
physical_location_1　 U Granada
physical_specimen_location　 CCME
physical_specimen_remaining　 true
plants　 true
public　 true
rel_growth_enterobacteriaceae　 279.7470431
rel_growth_enterococcus　 1
rel_growth_staphylococcus　 -0.218595577
relative_growth_mesophiles　 -0.218595577
required_sample_info_status　 completed
sample name　 qiita_sid_1632:1632.E1D08.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
sample type　 bird egg shell
sample_nest　 Crialo.cc19e.1
sample_progress　 sequenced (16S)
sampling time　 1
sampling_code_id　 67
species name　 Clamator glandarius
staphylococcus_density　 0.279747043
storing_days　 2
unhatched_eggs　 Missing: Not provided
year　 2007
properties　▽ 
{...}
dbXrefs
bioproject　 PRJEB14786
sra-run　 ERR1529755
sra-submission　 ERA674159
sra-study　 ERP016455
sra-sample　 ERS1247191
sra-experiment　 ERX1600647
distribution JSONJSON-LD
Download
biosample_set.xml.gz　 HTTPS FTP
status public
visibility unrestricted-access
dateCreated 2016-07-14T12:07:13Z
dateModified 2021-08-21T12:49:18Z
datePublished 2016-07-13T00:00:00Z