home > biosample > SAMEA4076780
identifier SAMEA4076780
type biosample
sameAs
sra-sample  ERS1247890
organism marine metagenome
attributes
ENA first public  2016-07-14
ENA last update  2016-07-13
ENA-CHECKLIST  ERC000011
External Id  SAMEA4076780
INSDC center alias  UCSDMI
INSDC center name  University of California San Diego Microbiome Initiative
INSDC first public  2016-07-14T17:01:39Z
INSDC last update  2016-07-13T15:30:49Z
INSDC status  public
Submitter Id  qiita_sid_1222:1222.B1.5.14.06
afc_bacteria  4994903
afc_coccolithopores  967
afc_cryptophytes  461
afc_large_picoeukaryotes  7059
afc_nanoflagellates  2277
afc_small_picoeukaryotes  27953
afc_synechoccus  8795
alloxanthin  Missing: Not collected
altitude  0
anonymized name  B1-5.14.06
assigned_from_geo  true
bb_carotene  Missing: Not collected
butfucoxanthin  Missing: Not collected
chlorophyl_b  Missing: Not collected
chlorophyl_c2  Missing: Not collected
chorophyll_c3  Missing: Not collected
collection date  5/14/06 0:00
collection_timestamp  05/14/2006
common name  marine metagenome
country  GAZ:Norway
d_vinyl_chl_b  Missing: Not collected
depth  0
di_vinyl_chl_a  Missing: Not collected
diadinoxanthin  Missing: Not collected
diatoxanthin  Missing: Not collected
dna_extracted  true
elevation  44.1
empo_0  EMP sample
empo_1  Free-living
empo_2  Saline
empo_3  Water (saline)
env biome  marine biome
env feature  ocean
env matter  sea water
env package  water
env_material  sea water
extracted DNA avail now  true
fluorescence  14.4
fucoxanthin  Missing: Not collected
geo loc name  Norway:Bergen
hexfucoxanthin  Missing: Not collected
host subject id  B1-5.14.06
latitude  60.27
longitude  5.22
lutein  Missing: Not collected
neoxanthin  Missing: Not collected
nitrate  3.53
org_carb  997
org_nitro  164
peridinin  Missing: Not collected
phosphate  0.31
physical_specimen_location  ANL
physical_specimen_remaining  true
prasinoxanthin  Missing: Not collected
primary_prod  578
public  true
required_sample_info_status  completed
salinity  31.4
sample name  qiita_sid_1222:1222.B1.5.14.06
sample type  sea water
sample_progress  sequenced (16S)
temp  9.4
violaxanthin  Missing: Not collected
zeaxanthin  Missing: Not collected
properties 
{...}
dbXrefs
bioproject  PRJEB14793
sra-run  ERR1530731
sra-submission  ERA674239
sra-study  ERP016464
sra-sample  ERS1247890
sra-experiment  ERX1601623
distribution JSONJSON-LD
Download
biosample_set.xml.gz  HTTPS FTP
status public
visibility unrestricted-access
dateCreated 2016-07-15T15:08:02Z
dateModified 2021-08-21T12:50:36Z
datePublished 2016-07-14T00:00:00Z