| ENA first public |
2016-07-23 |
| ENA last update |
2017-08-05 |
| ENA-CHECKLIST |
ERC000011 |
| External Id |
SAMEA4353724 |
| INSDC center alias |
UCSDMI |
| INSDC center name |
University of California San Diego Microbiome Initiative |
| INSDC first public |
2016-07-23T17:04:36Z |
| INSDC last update |
2017-08-05T22:57:42Z |
| INSDC status |
public |
| Submitter Id |
qiita_sid_10317:10317.000017749 |
| acid_reflux |
Not provided |
| acne medication |
false |
| acne_medication_otc |
false |
| add_adhd |
I do not have this condition |
| age cat |
40s |
| age years |
46 |
| age_corrected |
46 |
| alcohol consumption |
true |
| alcohol_frequency |
Occasionally (1-2 times/week) |
| alcohol_types |
Not provided |
| alcohol_types_beercider |
No |
| alcohol_types_red_wine |
true |
| alcohol_types_sour_beers |
false |
| alcohol_types_spiritshard_alcohol |
true |
| alcohol_types_unspecified |
false |
| alcohol_types_white_wine |
true |
| allergic to i have no food allergies that i know of |
true |
| allergic_to |
Not provided |
| allergic_to_other |
false |
| allergic_to_peanuts |
false |
| allergic_to_shellfish |
false |
| allergic_to_tree_nuts |
false |
| allergic_to_unspecified |
false |
| alzheimers |
I do not have this condition |
| anonymized name |
000017749 |
| antibiotic_history |
Year |
| appendix_removed |
false |
| artificial_sweeteners |
Not provided |
| asd |
I do not have this condition |
| autoimmune |
I do not have this condition |
| birth year |
1969 |
| bmi |
22.67 |
| bmi_cat |
Normal |
| bmi_corrected |
22.67 |
| body habitat |
UBERON:feces |
| body product |
UBERON:feces |
| body site |
UBERON:feces |
| bowel_movement_frequency |
One |
| bowel_movement_quality |
I tend to have normal formed stool - Type 3 and 4 |
| breastmilk_formula_ensure |
false |
| cancer |
Not provided |
| cancer treatment |
Not provided |
| cardiovascular_disease |
I do not have this condition |
| cat |
true |
| cdiff |
I do not have this condition |
| census_region |
Northeast |
| chickenpox |
Yes |
| clinical condition |
Self-diagnosed |
| collection date |
2016-06-06 |
| collection month |
June |
| collection season |
Summer |
| collection time |
16:00 |
| collection_timestamp |
2016-06-06 16:00 |
| consume_animal_products_abx |
No |
| contraceptive |
No |
| cosmetics_frequency |
Regularly (3-5 times/week) |
| country |
USA |
| country of birth |
United States |
| country_residence |
Not provided |
| csection |
false |
| deodorant_use |
I do not use deodorant or an antiperspirant |
| depression_bipolar_schizophrenia |
Diagnosed by a medical professional (doctor, physician assistant) |
| diabetes |
I do not have this condition |
| diabetes type |
Not provided |
| diet type |
Omnivore |
| dna_extracted |
true |
| dog |
false |
| dominant hand |
I am right handed |
| drinking_water_source |
Well |
| drinks_per_session |
Not provided |
| economic_region |
New England |
| elevation |
105.3 |
| env biome |
dense settlement biome |
| env feature |
human-associated habitat |
| env package |
human-gut |
| env_material |
feces |
| epilepsy_or_seizure_disorder |
I do not have this condition |
| exercise_frequency |
Regularly (3-5 times/week) |
| exercise_location |
Both |
| fed_as_infant |
A mixture of breast milk and formula |
| fermented_plant_frequency |
Daily |
| flossing_frequency |
Regularly (3-5 times/week) |
| flu_vaccine_date |
I have not gotten the flu vaccine in the past year. |
| frozen_dessert_frequency |
Rarely (less than once/week) |
| fruit_frequency |
Occasionally (1-2 times/week) |
| fungal_overgrowth |
Diagnosed by an alternative medicine practitioner |
| geo loc name |
USA:VT |
| gluten |
No |
| has_physical_specimen |
true |
| height cm |
160 |
| height_units |
centimeters |
| high_fat_red_meat_frequency |
Regularly (3-5 times/week) |
| homecooked_meals_frequency |
Daily |
| host common name |
human |
| host subject id |
7e6ed469bb66f465a4455a93f568cb1761557a188c136e678caa316f2e674f18a8f2728be09cfa2bcadf43b6b756d5706250a9fc636b8fe5a07e5574ec957dfa |
| host taxid |
9606 |
| ibd |
I do not have this condition |
| ibd diagnosis |
Not provided |
| ibd_diagnosis_refined |
Not provided |
| ibs |
I do not have this condition |
| kidney_disease |
I do not have this condition |
| lactose |
true |
| last_move |
I have lived in my current state of residence for more than a year. |
| last_travel |
6 months |
| latitude |
44.5 |
| level_of_education |
Bachelor's degree |
| liver_disease |
I do not have this condition |
| livingwith |
No |
| longitude |
-73.1 |
| lowgrain_diet_type |
true |
| lung disease |
I do not have this condition |
| meat_eggs_frequency |
Regularly (3-5 times/week) |
| mental_illness |
Not provided |
| mental_illness_type |
Not provided |
| mental_illness_type_anorexia_nervosa |
Not provided |
| mental_illness_type_bipolar_disorder |
Not provided |
| mental_illness_type_bulimia_nervosa |
Not provided |
| mental_illness_type_depression |
Not provided |
| mental_illness_type_ptsd_posttraumatic_stress_disorder |
Not provided |
| mental_illness_type_schizophrenia |
Not provided |
| mental_illness_type_substance_abuse |
Not provided |
| mental_illness_type_unspecified |
Not provided |
| migraine |
I do not have this condition |
| milk_cheese_frequency |
Daily |
| milk_substitute_frequency |
Rarely (less than once/week) |
| multivitamin |
false |
| nail_biter |
false |
| non_food_allergies |
Not provided |
| non_food_allergies_beestings |
false |
| non_food_allergies_drug_eg_penicillin |
false |
| non_food_allergies_pet_dander |
false |
| non_food_allergies_poison_ivyoak |
false |
| non_food_allergies_sun |
false |
| non_food_allergies_unspecified |
true |
| olive_oil |
Daily |
| one_liter_of_water_a_day_frequency |
Daily |
| other_supplement_frequency |
true |
| pets_other |
Not provided |
| physical_specimen_location |
UCSDMI |
| physical_specimen_remaining |
true |
| pku |
I do not have this condition |
| pool_frequency |
Never |
| poultry_frequency |
Occasionally (1-2 times/week) |
| pregnant |
false |
| prepared_meals_frequency |
Rarely (less than once/week) |
| probiotic_frequency |
Daily |
| public |
true |
| race |
Caucasian |
| ready_to_eat_meals_frequency |
Never |
| red_meat_frequency |
Regularly (3-5 times/week) |
| roommates_in_study |
No |
| salted_snacks_frequency |
Rarely (less than once/week) |
| sample name |
qiita_sid_10317:10317.000017749 |
| sample type |
Stool |
| seafood_frequency |
Rarely (less than once/week) |
| seasonal_allergies |
No |
| sex |
female |
| sibo |
I do not have this condition |
| skin_condition |
Self-diagnosed |
| sleep_duration |
8 or more hours |
| smoking_frequency |
Never |
| softener |
No |
| specialized_diet |
Not provided |
| specialized_diet_exclude_dairy |
Not provided |
| specialized_diet_exclude_nightshades |
Not provided |
| specialized_diet_exclude_refined_sugars |
Not provided |
| specialized_diet_fodmap |
Not provided |
| specialized_diet_halaal |
Not provided |
| specialized_diet_i_do_not_eat_a_specialized_diet |
Not provided |
| specialized_diet_kosher |
Not provided |
| specialized_diet_modified_paleo_diet |
Not provided |
| specialized_diet_other_restrictions_not_described_here |
Not provided |
| specialized_diet_paleodiet_or_primal_diet |
Not provided |
| specialized_diet_raw_food_diet |
Not provided |
| specialized_diet_unspecified |
Not provided |
| specialized_diet_westenprice_or_other_lowgrain_low_processed_fo |
Not provided |
| state |
VT |
| subset_age |
true |
| subset_antibiotic_history |
false |
| subset_bmi |
true |
| subset_diabetes |
true |
| subset_healthy |
false |
| subset_ibd |
true |
| sugar_sweetened_drink_frequency |
Never |
| sugary_sweets_frequency |
Regularly (3-5 times/week) |
| survey_id |
0c46cd13e319c710 |
| teethbrushing_frequency |
Daily |
| thyroid |
I do not have this condition |
| tonsils_removed |
false |
| types_of_plants |
Not provided |
| vegetable_frequency |
Daily |
| vioscreen_a_bev |
0.407150687 |
| vioscreen_a_cal |
48.41547517 |
| vioscreen_acesupot |
0 |
| vioscreen_activity_level |
Not provided |
| vioscreen_add_sug |
7.950957834 |
| vioscreen_addsugar |
41.72539598 |
| vioscreen_adsugtot |
33.87871094 |
| vioscreen_age |
215 |
| vioscreen_alanine |
4.758712476 |
| vioscreen_alcohol |
6.195917835 |
| vioscreen_alcohol_servings |
0.40715 |
| vioscreen_alphacar |
1704.791952 |
| vioscreen_alphtoce |
18.80748475 |
| vioscreen_alphtoco |
15.00953018 |
| vioscreen_arginine |
5.898629468 |
| vioscreen_ash |
25.69920805 |
| vioscreen_aspartam |
0 |
| vioscreen_aspartic |
9.183863977 |
| vioscreen_avcarb |
188.7901969 |
| vioscreen_bcodeid |
Not provided |
| vioscreen_betacar |
10794.21096 |
| vioscreen_betacryp |
172.8316032 |
| vioscreen_betaine |
109.039908 |
| vioscreen_betatoco |
0.428876736 |
| vioscreen_biochana |
0.017534248 |
| vioscreen_bmi |
Not provided |
| vioscreen_caffeine |
126.3691781 |
| vioscreen_calcium |
Yes |
| vioscreen_calcium_avg |
71 |
| vioscreen_calcium_dose |
500 |
| vioscreen_calcium_freq |
1 |
| vioscreen_calcium_from_dairy_servings |
1.47279 |
| vioscreen_calcium_servings |
3.30956 |
| vioscreen_calories |
2480.515068 |
| vioscreen_carbo |
215.080244 |
| vioscreen_cholest |
718.2404966 |
| vioscreen_choline |
655.9576627 |
| vioscreen_clac9t11 |
0.279205469 |
| vioscreen_clat10c12 |
0.060575344 |
| vioscreen_copper |
5.865067824 |
| vioscreen_coumest |
0.019643836 |
| vioscreen_cystine |
1.309780591 |
| vioscreen_d_cheese |
0.562356191 |
| vioscreen_d_milk |
0.686767118 |
| vioscreen_d_tot_soym |
1.472794541 |
| vioscreen_d_total |
1.472794541 |
| vioscreen_d_yogurt |
0.213616442 |
| vioscreen_daidzein |
2.254548373 |
| vioscreen_database |
NDSR - V44 |
| vioscreen_delttoco |
2.684164303 |
| vioscreen_discfat_oil |
34.54037885 |
| vioscreen_discfat_sol |
81.38758027 |
| vioscreen_dob |
1/1/1800 |
| vioscreen_eer |
Not provided |
| vioscreen_email |
Not provided |
| vioscreen_erythr |
0.002 |
| vioscreen_f_citmlb |
0.480246641 |
| vioscreen_f_nj_citmlb |
0.478054851 |
| vioscreen_f_nj_other |
1.202493161 |
| vioscreen_f_nj_total |
1.680547845 |
| vioscreen_f_other |
1.202493161 |
| vioscreen_f_total |
1.682712168 |
| vioscreen_fat |
139.1736515 |
| vioscreen_fiber |
26.02380137 |
| vioscreen_fibh2o |
5.827012655 |
| vioscreen_fibinso |
20.20742321 |
| vioscreen_finished |
9/13/15 |
| vioscreen_fish_servings |
0.24885 |
| vioscreen_fol_deqv |
814.5535103 |
| vioscreen_fol_nat |
607.2785959 |
| vioscreen_fol_syn |
121.850899 |
| vioscreen_formontn |
0.003369863 |
| vioscreen_fried_fish_servings |
0 |
| vioscreen_fried_food_servings |
0 |
| vioscreen_frt5_day |
2 |
| vioscreen_frtsumm |
3.4 |
| vioscreen_fructose |
19.7136692 |
| vioscreen_fruit_servings |
2 |
| vioscreen_g_nwhl |
3.386876605 |
| vioscreen_g_total |
4.179013939 |
| vioscreen_g_whl |
0.792136916 |
| vioscreen_galactos |
0.483041089 |
| vioscreen_gammtoco |
13.28120719 |
| vioscreen_gender |
F |
| vioscreen_genistn |
3.593205867 |
| vioscreen_glac |
82.35982449 |
| vioscreen_gltc |
91.16786173 |
| vioscreen_glucose |
21.64569644 |
| vioscreen_glutamic |
17.32865609 |
| vioscreen_glycine |
4.320274708 |
| vioscreen_glycitn |
0.587095872 |
| vioscreen_grams |
3397.492123 |
| vioscreen_hei2010_dairy |
4.6 |
| vioscreen_hei2010_empty_calories |
9.7 |
| vioscreen_hei2010_fatty_acids |
2 |
| vioscreen_hei2010_fruit |
4.2 |
| vioscreen_hei2010_greens_beans |
5 |
| vioscreen_hei2010_protien_foods |
5 |
| vioscreen_hei2010_refined_grains |
10 |
| vioscreen_hei2010_score |
57.6 |
| vioscreen_hei2010_sea_foods_plant_protiens |
5 |
| vioscreen_hei2010_sodium |
0 |
| vioscreen_hei2010_veg |
5 |
| vioscreen_hei2010_whole_fruit |
5 |
| vioscreen_hei2010_whole_grains |
2.1 |
| vioscreen_hei_drk_g_org_veg_leg |
5 |
| vioscreen_hei_fruit |
4.2 |
| vioscreen_hei_grains |
2.8 |
| vioscreen_hei_meat_beans |
10 |
| vioscreen_hei_milk |
4.6 |
| vioscreen_hei_non_juice_frt |
5 |
| vioscreen_hei_oils |
10 |
| vioscreen_hei_sat_fat |
0 |
| vioscreen_hei_score |
56.5 |
| vioscreen_hei_sodium |
0 |
| vioscreen_hei_sol_fat_alc_add_sug |
8.8 |
| vioscreen_hei_veg |
5 |
| vioscreen_hei_whl_grains |
1.1 |
| vioscreen_height |
Not provided |
| vioscreen_histidin |
2.726986234 |
| vioscreen_inositol |
0.118986334 |
| vioscreen_iron |
19.2961098 |
| vioscreen_isoleuc |
4.371149936 |
| vioscreen_isomalt |
0 |
| vioscreen_joules |
10378.48014 |
| vioscreen_juice_servings |
0.00433 |
| vioscreen_lactitol |
0 |
| vioscreen_lactose |
11.53909594 |
| vioscreen_legumes |
0.173232886 |
| vioscreen_leucine |
7.674765893 |
| vioscreen_line_gi |
375.5506421 |
| vioscreen_low_fat_dairy_serving |
0.23778 |
| vioscreen_lutzeax |
9208.95411 |
| vioscreen_lycopene |
7466.486301 |
| vioscreen_lysine |
6.496438891 |
| vioscreen_m_egg |
1.086547852 |
| vioscreen_m_fish_hi |
0.035452054 |
| vioscreen_m_fish_lo |
0.106383567 |
| vioscreen_m_frank |
0.095972599 |
| vioscreen_m_meat |
2.011972757 |
| vioscreen_m_mpf |
5.139561818 |
| vioscreen_m_nutsd |
2.291424644 |
| vioscreen_m_organ |
2.058575356 |
| vioscreen_m_poult |
0.831260284 |
| vioscreen_m_soy |
0.086602747 |
| vioscreen_magnes |
392.0951199 |
| vioscreen_maltitol |
0 |
| vioscreen_maltose |
3.249808032 |
| vioscreen_mangan |
5.442110245 |
| vioscreen_mannitol |
0.485945192 |
| vioscreen_methhis3 |
11.87901327 |
| vioscreen_methion |
2.141890852 |
| vioscreen_mfa141 |
0.145999982 |
| vioscreen_mfa161 |
2.14389013 |
| vioscreen_mfa181 |
49.27027504 |
| vioscreen_mfa201 |
0.588356206 |
| vioscreen_mfa221 |
0.016109589 |
| vioscreen_mfatot |
52.44905287 |
| vioscreen_multi_calcium_avg |
28 |
| vioscreen_multi_calcium_dose |
200 |
| vioscreen_multivitamin |
Yes |
| vioscreen_multivitamin_freq |
1 |
| vioscreen_natoco |
13.14977793 |
| vioscreen_nccglbr |
149.7372324 |
| vioscreen_nccglgr |
104.7478168 |
| vioscreen_niacin |
29.54405501 |
| vioscreen_niacineq |
47.64879067 |
| vioscreen_nitrogen |
15.93468402 |
| vioscreen_non_fried_fish_servings |
0.24885 |
| vioscreen_nutrient_recommendation |
Default |
| vioscreen_omega3 |
2.200438115 |
| vioscreen_oxalic |
338.689619 |
| vioscreen_oxalicm |
337.9990368 |
| vioscreen_pantothe |
10.12093188 |
| vioscreen_pectins |
4.903589871 |
| vioscreen_pfa182 |
20.28939426 |
| vioscreen_pfa183 |
2.140767137 |
| vioscreen_pfa184 |
0.001452055 |
| vioscreen_pfa204 |
0.366191874 |
| vioscreen_pfa205 |
0.00920548 |
| vioscreen_pfa225 |
0.009643835 |
| vioscreen_pfa226 |
0.039616436 |
| vioscreen_pfatot |
23.26879281 |
| vioscreen_phenylal |
4.508464991 |
| vioscreen_phosphor |
1658.099315 |
| vioscreen_phytic |
800.1157534 |
| vioscreen_pinitol |
0.012931508 |
| vioscreen_potass |
3582.363014 |
| vioscreen_procdate |
10/28/15 |
| vioscreen_proline |
5.744959332 |
| vioscreen_protanim |
62.68433219 |
| vioscreen_protein |
97.42061216 |
| vioscreen_protocol |
Knight Lab, University of Colorado Boulder |
| vioscreen_protveg |
34.73377836 |
| vioscreen_questionnaire |
Egg White Standard Questionnaire (V3) |
| vioscreen_recno |
83 |
| vioscreen_retinol |
4382.928425 |
| vioscreen_rgrain |
3.343095502 |
| vioscreen_ribofla |
3.512849489 |
| vioscreen_sacchar |
0 |
| vioscreen_salad_vegetable_servings |
1.4006 |
| vioscreen_satoco |
4.131945299 |
| vioscreen_selenium |
158.3347496 |
| vioscreen_serine |
4.687315055 |
| vioscreen_sfa100 |
1.199424597 |
| vioscreen_sfa120 |
1.756575911 |
| vioscreen_sfa140 |
4.684493726 |
| vioscreen_sfa160 |
26.99201894 |
| vioscreen_sfa170 |
0.281369834 |
| vioscreen_sfa180 |
12.74885087 |
| vioscreen_sfa200 |
0.312410976 |
| vioscreen_sfa220 |
0.415452095 |
| vioscreen_sfa40 |
1.438356164 |
| vioscreen_sfa60 |
0.870082155 |
| vioscreen_sfa80 |
0.601945224 |
| vioscreen_sfatot |
51.83350278 |
| vioscreen_sodium |
5409.825 |
| vioscreen_sorbitol |
0.529643939 |
| vioscreen_srvid |
20721 |
| vioscreen_starch |
75.87813035 |
| vioscreen_started |
9/13/15 |
| vioscreen_subject_id |
Not provided |
| vioscreen_sucpoly |
0 |
| vioscreen_sucrlose |
0 |
| vioscreen_sucrose |
34.61992455 |
| vioscreen_sweet_servings |
0.78522 |
| vioscreen_tagatose |
2.33402735 |
| vioscreen_tfa161t |
0.073863016 |
| vioscreen_tfa181t |
3.160821784 |
| vioscreen_tfa182t |
0.500219183 |
| vioscreen_tgrain |
4.558849262 |
| vioscreen_thiamin |
1.532109342 |
| vioscreen_threonin |
3.800465205 |
| vioscreen_time |
35 |
| vioscreen_totaltfa |
3.809123502 |
| vioscreen_totcla |
0.339835661 |
| vioscreen_totfolat |
729.1288527 |
| vioscreen_totsugar |
91.65639983 |
| vioscreen_tryptoph |
1.086383642 |
| vioscreen_tyrosine |
3.475917701 |
| vioscreen_user_id |
20721 |
| vioscreen_v_drkgr |
0.642575366 |
| vioscreen_v_orange |
0.378602705 |
| vioscreen_v_other |
1.458903942 |
| vioscreen_v_potato |
0.12049316 |
| vioscreen_v_starcy |
0.234739727 |
| vioscreen_v_tomato |
0.342000026 |
| vioscreen_v_total |
3.17742435 |
| vioscreen_valine |
5.106959346 |
| vioscreen_veg5_day |
5.3 |
| vioscreen_vegetable_servings |
3 |
| vioscreen_vegsumm |
6.3 |
| vioscreen_visit |
1 |
| vioscreen_vita_iu |
34164.32603 |
| vioscreen_vita_rae |
5360.680479 |
| vioscreen_vita_re |
6338.432192 |
| vioscreen_vitb12 |
29.85096319 |
| vioscreen_vitb6 |
2.894685092 |
| vioscreen_vitc |
163.0612479 |
| vioscreen_vitd |
6.013835081 |
| vioscreen_vitd2 |
0.215232891 |
| vioscreen_vitd3 |
5.798684316 |
| vioscreen_vitd_iu |
240.5534033 |
| vioscreen_vite_iu |
23.74117348 |
| vioscreen_vitk |
418.0973887 |
| vioscreen_water |
2942.909932 |
| vioscreen_weight |
Not provided |
| vioscreen_wgrain |
1.215698577 |
| vioscreen_whole_grain_servings |
0.79214 |
| vioscreen_xylitol |
0.038109596 |
| vioscreen_zinc |
15.14660477 |
| vitamin_b_supplement_frequency |
Occasionally (1-2 times/week) |
| vitamin_d_supplement_frequency |
Occasionally (1-2 times/week) |
| vivid_dreams |
Not provided |
| weight kg |
58 |
| weight_change |
Remained stable |
| weight_units |
kilograms |
| whole_eggs |
Regularly (3-5 times/week) |
| whole_grain_frequency |
Occasionally (1-2 times/week) |