home > biosample > SAMEA4354240
identifier SAMEA4354240
type biosample
sameAs
sra-sample　 ERS1265689
organism soil metagenome
attributes
ENA first public　 2016-07-24
ENA last update　 2016-07-23
ENA-CHECKLIST　 ERC000011
External Id　 SAMEA4354240
INSDC center alias　 UCSDMI
INSDC center name　 University of California San Diego Microbiome Initiative
INSDC first public　 2016-07-24T17:01:54Z
INSDC last update　 2016-07-23T06:23:40Z
INSDC status　 public
Submitter Id　 qiita_sid_10180:10180.J9IV
activated_carbon　 false
altitude　 0
anonymized name　 J9IV
assigned_from_geo　 true
base saturation　 81.5
calcium　 41
cation_ex_capacity　 69.45
claysand_g_per_kg　 253
collection_timestamp　 Missing: Not provided
common name　 soil metagenome
country　 GAZ:Brazil
cur_land_use　 crop cover
cur_vegetation　 sugar cane
depth　 0
dna_exracted　 true
dna_extracted　 true
elevation　 400-600
env biome　 cropland biome
env feature　 agricultural soil
env matter　 soil
env package　 soil
env_material　 soil
extracted DNA avail now　 true
filter_cake　 false
geo loc name　 Brazil:Sao Paulo
has_extracted_data　 true
has_physical_specimen　 true
host common name　 soil
host subject id　 J9IV
host taxid　 410658
hydrogen_and_aluminum　 13
latitude　 -20.9444
longitude　 -49.9092
magnesium　 10
mechanized_harvesting　 true
mineral_fertilizers　 true
ph　 6
ph_meth　 CaCl113
phosphorus　 30
physical samp avail now　 true
physical_specimen_location　 PNNL
physical_specimen_remaining　 false
potassium　 5.45
productivity_tons_per_hectare　 70
public　 true
required_sample_info_status　 completed
sample name　 qiita_sid_10180:10180.J9IV
sample type　 soil
sample_progress　 sequenced 16S
sand_g_per_kg　 716
silt_g_per_k　 31
soil_organic_matter_g_per_cubic_dm　 18
sugarcane_burning　 false
sum_of_bases　 56.45
temp　 26
time_land_use_years　 5
vinasse　 true
properties　▽ 
{...}
dbXrefs
bioproject　 PRJEB14901
sra-run　 ERR1546217
sra-submission　 ERA678274
sra-study　 ERP016582
sra-sample　 ERS1265689
sra-experiment　 ERX1616987
distribution JSONJSON-LD
Download
biosample_set.xml.gz　 HTTPS FTP
status public
visibility unrestricted-access
dateCreated 2016-07-25T12:06:47Z
dateModified 2021-08-21T13:02:30Z
datePublished 2016-07-24T00:00:00Z